RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TBC1D24Q9ULP9 559 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 PLCL2Q9UPR0 1127 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 ERI2A8K979 691 aaKnown RBP14.88□□□□□ -0.03
CCDC50-201ENST00000392455 PRMT5O14744 637 aaPredicted RBP14.88□□□□□ -0.03
CCDC50-201ENST00000392455 GMPSP49915 693 aaPredicted RBP14.88□□□□□ -0.03
CCDC50-201ENST00000392455 USP45Q70EL2 814 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 MED28Q9H204 178 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 TRPV5Q9NQA5 729 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 MAP10Q9P2G4 905 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 NOS1APO75052 506 aaPredicted RBP14.88□□□□□ -0.03
CCDC50-201ENST00000392455 CDH17Q12864 832 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 OR2L5Q8NG80 312 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 VAT1Q99536 393 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 C3orf14Q9HBI5 128 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 OPTCQ9UBM4 332 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 RPL26L1Q9UNX3 145 aaKnown RBP14.88□□□□□ -0.03
CCDC50-201ENST00000392455 PDE2AO00408 941 aaPredicted RBP14.88□□□□□ -0.03
CCDC50-201ENST00000392455 RLN1P04808 185 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 CDK16Q00536 496 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 CUL2Q13617 745 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 CBWD3Q5JTY5 395 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 CBWD5Q5RIA9 395 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 SULT1C3Q6IMI6 304 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 TMEM17Q86X19 198 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 MGME1Q9BQP7 344 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 KANSL3Q9P2N6 904 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 NUP50Q9UKX7 468 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 VSTM5A8MXK1 200 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 SEC22BO75396 215 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 GZMAP12544 262 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 FGFR2P21802 821 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 TSGA10IPQ3SY00 556 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 SEZ6Q53EL9 994 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 RETSATQ6NUM9 610 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 TMEM192Q8IY95 271 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 ANKS1AQ92625 1134 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 GPER1Q99527 375 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 ANKDD1BA6NHY2 528 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 MBL2P11226 248 aaPredicted RBP14.88□□□□□ -0.03
CCDC50-201ENST00000392455 CPA2P48052 419 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 FXR1P51114 621 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCDC50-201ENST00000392455 MBTD1Q05BQ5 628 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 DPYSQ14117 519 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 GXYLT1Q4G148 440 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 RNF44Q7L0R7 432 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 ZNF567Q8N184 647 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 KLHL23Q8NBE8 558 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 LINC00116Q8NCU8 138 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 SLC6A15Q9H2J7 730 aa14.88□□□□□ -0.03
CCDC50-201ENST00000392455 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 RBAK-RBAKDNI3L0D1 243 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 NET1Q7Z628 596 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 SEPHS2Q99611 448 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 FAM126AQ9BYI3 521 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 AASSQ9UDR5 926 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ALG6Q9Y672 507 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 TARBP1Q13395 1621 aaKnown RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 DDX3XO00571 662 aaKnown RBP eCLIP14.87□□□□□ -0.033e-9■■■□□ 17.1
CCDC50-201ENST00000392455 DGKAP23743 735 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 PSMA1P25786 263 aaKnown RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 PTX3P26022 381 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 USP46P62068 366 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 TTYH1Q9H313 450 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 KCNK4Q9NYG8 393 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 SLC33A1O00400 549 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 RPL4P36578 427 aaKnown RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 FAXCQ5TGI0 409 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 KLHL35Q6PF15 583 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 TBATAQ96M53 351 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 FCHO1O14526 889 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 PVALBP20472 110 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ADAM8P78325 824 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ZNF615Q8N8J6 731 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 CYP3A43Q9HB55 503 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 PSMD13Q9UNM6 376 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 TDRKHQ9Y2W6 561 aaKnown RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 MMP14P50281 582 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 TUBA1BP68363 451 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ATP13A4Q4VNC1 1196 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 AAGABQ6PD74 315 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ZNF621Q6ZSS3 439 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 TUBA1AQ71U36 451 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 MILR1Q7Z6M3 343 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 KAT2BQ92831 832 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ACOX2Q99424 681 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 VPS28Q9UK41 221 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ABCA6Q8N139 1617 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 M0R129 80 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 GTPBP1O00178 669 aaKnown RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 GIMD1P0DJR0 217 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ECHS1P30084 290 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 NOS2P35228 1153 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 SLC7A2P52569 658 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 ZCCHC12Q6PEW1 402 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 CRISPLD1Q9H336 500 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 FBXO9Q9UK97 447 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 XKRYO14609 159 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 SLC9A3R1O14745 358 aaPredicted RBP14.87□□□□□ -0.03
CCDC50-201ENST00000392455 OR10H2O60403 315 aa14.87□□□□□ -0.03
CCDC50-201ENST00000392455 TMEM44Q2T9K0 475 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms