RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 CAV1Q03135 178 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 MYBPC2Q14324 1141 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 HIF1AQ16665 826 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 MSANTD2Q6P1R3 559 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 R3HCC1LQ7Z5L2 792 aaKnown RBP9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 PIGZQ86VD9 579 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 C2orf73Q8N5S3 287 aaPredicted RBP9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 EMC1Q8N766 993 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 RIN3Q8TB24 985 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 TATDN2Q93075 761 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 ARMC5Q96C12 935 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 NUS1Q96E22 293 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 TOX2Q96NM4 488 aa9.31□□□□□ -0.92
LIMCH1-202ENST00000381753 ATP9AO75110 1047 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 ABCB1P08183 1280 aaPredicted RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 KITP10721 976 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 RBP3P10745 1247 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CYP3A5P20815 502 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 TACR2P21452 398 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 NTSR1P30989 418 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 FLT3P36888 993 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CCT8P50990 548 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 SNTA1Q13424 505 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 ZNF720Q7Z2F6 126 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 ACBD6Q9BR61 282 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 IRX2Q9BZI1 471 aaPredicted RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 PRKD2Q9BZL6 878 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 LRRC40Q9H9A6 602 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CD84Q9UIB8 345 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 LSM8O95777 96 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 TYRP14679 529 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 PRKAG1P54619 331 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 TRIP4Q15650 581 aaPredicted RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 ANKMY2Q8IV38 441 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 KIRREL3Q8IZU9 778 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 UBE2J2Q8N2K1 259 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 PHC3Q8NDX5 983 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 RFFLQ8WZ73 363 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 BTBD6Q96KE9 485 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 PPP1R36Q96LQ0 422 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 C17orf62Q9BQA9 187 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 TRIM55Q9BYV6 548 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 PNO1Q9NRX1 252 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 C10orf71Q711Q0 1435 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 GTPBP10A4D1E9 387 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 NOL4O94818 638 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CD2BP2O95400 341 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 IL33O95760 270 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CYP3A4P08684 503 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 STK4Q13043 487 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 POU6F1Q14863 301 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 MUM1Q2TAK8 710 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 FAM71DQ8N9W8 422 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CPEB1Q9BZB8 566 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 LZTS1Q9Y250 596 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 A0A0J9YVX5 310 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 SEMA4FO95754 770 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 MYL2P10916 166 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CD86P42081 329 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 GPD2P43304 727 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 KCNT1Q5JUK3 1230 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 EID2Q8N6I1 236 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CXorf38Q8TB03 319 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 TAS1R2Q8TE23 839 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CCNL2Q96S94 520 aaPredicted RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 SERPINI1Q99574 410 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 CMKLR1Q99788 373 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 SGIP1Q9BQI5 828 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 B4GALT7Q9UBV7 327 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 DIAPH2O60879 1101 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 SLC35G6P0C7Q6 338 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 ATP1A3P13637 1013 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 EPCAMP16422 314 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 FMO4P31512 558 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 TRIP10Q15642 601 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 NFIL3Q16649 462 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 PTPN21Q16825 1174 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 ARSIQ5FYB1 569 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 UBXN11Q5T124 520 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 POMZP3Q6PJE2 187 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 LINGO4Q6UY18 593 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 PAGE2Q7Z2X7 111 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 GATAD2AQ86YP4 633 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 TMPRSS6Q8IU80 811 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 ADSSL1Q8N142 457 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 ZFP28Q8NHY6 868 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 C12orf66Q96MD2 445 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 WDR6Q9NNW5 1121 aaKnown RBP9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 GID8Q9NWU2 228 aa9.3□□□□□ -0.92
LIMCH1-202ENST00000381753 LGALS16A8MUM7 142 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 MSI1O43347 362 aaKnown RBP9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 KAT7O95251 611 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 KRT6AP02538 564 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 KRT6BP04259 564 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 CHGBP05060 677 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 KRT6CP48668 564 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 GPR15P49685 360 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 RIN1Q13671 783 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 WHAMMP3Q1A5X7 153 aa9.29□□□□□ -0.92
LIMCH1-202ENST00000381753 ZCCHC10Q8TBK6 192 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms