RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 RCOR3Q9P2K3 495 aaPredicted RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 C3orf18Q9UK00 162 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ADAM30Q9UKF2 790 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 COG5Q9UP83 839 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CNTNAP2Q9UHC6 1331 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 DCDC2CA8MYV0 355 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 HS6ST1O60243 411 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 TCEA3O75764 348 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CCDC166P0CW27 439 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 COL6A2P12110 1019 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 NPR3P17342 541 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 PTPN1P18031 435 aaKnown RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 PAX3P23760 479 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ADSSP30520 456 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ADSLP30566 484 aaPredicted RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 S100A3P33764 101 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 HALP42357 657 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 AIF1P55008 147 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 IL2P60568 153 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 BROXQ5VW32 411 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ANKS1BQ7Z6G8 1248 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 C18orf25Q96B23 403 aaPredicted RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 LENG9Q96B70 501 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 TCF12Q99081 682 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 HGH1Q9BTY7 390 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 POLR1EQ9GZS1 481 aaKnown RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 SEMA6AQ9H2E6 1030 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 FAM124BQ9H5Z6 455 aaPredicted RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 PIF1Q9H611 641 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 KANSL3Q9P2N6 904 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 STK39Q9UEW8 545 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 VPS28Q9UK41 221 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 MAPRE3Q9UPY8 281 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 PCDHB5Q9Y5E4 795 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 AP4B1Q9Y6B7 739 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 MYPNQ86TC9 1320 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 GNG14A0A1W2PPG7 69 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 H3BMM5 538 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CPSF4O95639 269 aaKnown RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 MLYCDO95822 493 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 POU1F1P28069 291 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 OR1E1P30953 314 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CHI3L1P36222 383 aaPredicted RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 NOVP48745 357 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 FAM187BQ17R55 369 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ZNF284Q2VY69 593 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 PLPPR4Q7Z2D5 763 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ALYREFQ86V81 257 aaKnown RBP8.48□□□□□ -1.05
VPS36-201ENST00000378060 KRT73Q86Y46 540 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 GPSM1Q86YR5 675 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 LRRC52Q8N7C0 313 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 TRAPPC12Q8WVT3 735 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ZCWPW1Q9H0M4 648 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 CDH19Q9H159 772 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 SNX15Q9NRS6 342 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ABCC13Q9NSE7 274 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 ADPRHL2Q9NX46 363 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 GRHL1Q9NZI5 618 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 PCDHB7Q9Y5E2 793 aa8.48□□□□□ -1.05
VPS36-201ENST00000378060 SPATA31C2B4DYI2 1134 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 PTGES3LE9PB15 166 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 BTN3A1O00481 513 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 PMM2O15305 246 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ASNA1O43681 348 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CCNT2O60583 730 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 SEC22BO75396 215 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 BANF1O75531 89 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RECQL4O94761 1208 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 MATKP42679 507 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ALDH7A1P49419 539 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 PPIL2Q13356 520 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 BFSP2Q13515 415 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 UBAP2LQ14157 1087 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 TRIP4Q15650 581 aaPredicted RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 SLC5A9Q2M3M2 681 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 STRADAQ7RTN6 431 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 OR8H2Q8N162 312 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 ZNF276Q8N554 614 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 B3GALNT2Q8NCR0 500 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 MRPS31Q92665 395 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 TRIM63Q969Q1 353 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 RCN3Q96D15 328 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 SLC4A5Q9BY07 1137 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CLK4Q9HAZ1 481 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 PCDH18Q9HCL0 1135 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 S100A14Q9HCY8 104 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 KRCC1Q9NPI7 259 aaPredicted RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 RSL24D1Q9UHA3 163 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 FBXO5Q9UKT4 447 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 PNMA8BQ9ULN7 279 aaPredicted RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 HBS1LQ9Y450 684 aaKnown RBP8.47□□□□□ -1.05
VPS36-201ENST00000378060 DYRK1BQ9Y463 629 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 FAM220BPB1ANY3 271 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CBX4O00257 560 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 B4GALT4O60513 344 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CBFA2T3O75081 653 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 NFICP08651 508 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 IMPDH2P12268 514 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 NFKB1P19838 968 aa8.47□□□□□ -1.05
VPS36-201ENST00000378060 CDKN2BP42772 138 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms