RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 HS3ST3A1Q9Y663 406 aa14.48□□□□□ -0.09
NELFE-201ENST00000375425 PTPRBP23467 1997 aa14.48□□□□□ -0.09
NELFE-201ENST00000375425 ANKRD62A6NC57 917 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 C16orf96A6NNT2 1141 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 KRIT1O00522 736 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 BUB1O43683 1085 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 AP1G1O43747 822 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 POP4O95707 220 aaKnown RBP14.47□□□□□ -0.09
NELFE-201ENST00000375425 CDK4P11802 303 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 FERP16591 822 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 CKMT2P17540 419 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 DGKAP23743 735 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 CLDN6P56747 220 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 MYLK3Q32MK0 819 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 EFHC2Q5JST6 749 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 PPP1R15BQ5SWA1 713 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 KIAA1161Q6NSJ0 714 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 DCUN1D2Q6PH85 259 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 GCNT7Q6ZNI0 430 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 Q6ZSR6 202 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 ABI3BPQ7Z7G0 1075 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 ZNF354CQ86Y25 554 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 MCOLN2Q8IZK6 566 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 PDCD7Q8N8D1 485 aaKnown RBP14.47□□□□□ -0.09
NELFE-201ENST00000375425 OR2AP1Q8NGE2 309 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 LRIG1Q96JA1 1093 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 BMFQ96LC9 184 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 CNPY3Q9BT09 278 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 NOL6Q9H6R4 1146 aaKnown RBP14.47□□□□□ -0.09
NELFE-201ENST00000375425 CAAP1Q9H8G2 361 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 TMEM63CQ9P1W3 806 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 FZD10Q9ULW2 581 aa14.47□□□□□ -0.09
NELFE-201ENST00000375425 KNTC1P50748 2209 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 POM121BA6NF01 834 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 TRIM38O00635 465 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 SIGLEC6O43699 453 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 CREB3O43889 395 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 GSRP00390 522 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 TNFAIP3P21580 790 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 SNRPD1P62314 119 aaKnown RBP14.46□□□□□ -0.09
NELFE-201ENST00000375425 ZNF211Q13398 564 aaPredicted RBP14.46□□□□□ -0.09
NELFE-201ENST00000375425 ANO6Q4KMQ2 910 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 ZNF805Q5CZA5 627 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 ATXN7L2Q5T6C5 722 aaPredicted RBP14.46□□□□□ -0.09
NELFE-201ENST00000375425 SLC22A18ASQ8N1D0 253 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 RTL3Q8N8U3 475 aaKnown RBP14.46□□□□□ -0.09
NELFE-201ENST00000375425 VOPP1Q96AW1 172 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 NAT10Q9H0A0 1025 aaKnown RBP14.46□□□□□ -0.09
NELFE-201ENST00000375425 UCKL1Q9NWZ5 548 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 TAS2R14Q9NYV8 317 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 DKK4Q9UBT3 224 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 RAXQ9Y2V3 346 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 GPSM3Q9Y4H4 160 aa14.46□□□□□ -0.09
NELFE-201ENST00000375425 FAM208BQ5VWN6 2430 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 ZSCAN5CA6NGD5 496 aaPredicted RBP14.45□□□□□ -0.1
NELFE-201ENST00000375425 IGLON5A6NGN9 336 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 TMCO5BA8MYB1 307 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 NEMP1O14524 444 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 RAD51BO15315 384 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 TSPAN6O43657 245 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 UGT2B4P06133 528 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 HNF1BP35680 557 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 AIF1P55008 147 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 OGDHQ02218 1023 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 SGCGQ13326 291 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 PROX2Q3B8N5 592 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 ZNF542PQ5EBM4 170 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 C19orf48Q6RUI8 117 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 PTAR1Q7Z6K3 402 aaPredicted RBP14.45□□□□□ -0.1
NELFE-201ENST00000375425 TTC7BQ86TV6 843 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 DCP2Q8IU60 420 aaKnown RBP14.45□□□□□ -0.1
NELFE-201ENST00000375425 NETO2Q8NC67 525 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 FAM174AQ8TBP5 190 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 BAP1Q92560 729 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 RAB7BQ96AH8 199 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 KLHL32Q96NJ5 620 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 EPAS1Q99814 870 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 KLC2Q9H0B6 622 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 CATSPERBQ9H7T0 1116 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 RTN4Q9NQC3 1192 aaKnown RBP14.45□□□□□ -0.1
NELFE-201ENST00000375425 LHX6Q9UPM6 363 aa14.45□□□□□ -0.1
NELFE-201ENST00000375425 COL5A1P20908 1838 aaPredicted RBP14.45□□□□□ -0.1
NELFE-201ENST00000375425 ZFYVE26Q68DK2 2539 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 ARID1BQ8NFD5 2236 aaPredicted RBP14.44□□□□□ -0.1
NELFE-201ENST00000375425 ITPR1Q14643 2758 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 A6NNZ2 444 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 WASH4PA8MWX3 477 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 PIAS2O75928 621 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 TMCC1O94876 653 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 ACP1P24666 158 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 ABL2P42684 1182 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 YBEYP58557 167 aaPredicted RBP14.44□□□□□ -0.1
NELFE-201ENST00000375425 TARDBPQ13148 414 aaKnown RBP eCLIP14.44□□□□□ -0.1
NELFE-201ENST00000375425 ILKQ13418 452 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 MAMLD1Q13495 774 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 HS1BP3Q53T59 392 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 INO80DQ53TQ3 878 aaPredicted RBP14.44□□□□□ -0.1
NELFE-201ENST00000375425 HES3Q5TGS1 186 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 GDPD4Q6W3E5 623 aa14.44□□□□□ -0.1
NELFE-201ENST00000375425 TMC6Q7Z403 805 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms