RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 TBX3O15119 743 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ZW10O43264 779 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GAS7O60861 476 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 XYLBO75191 536 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GH2P01242 217 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ARNTP27540 789 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ADORA2AP29274 412 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 HADHAP40939 763 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GPD2P43304 727 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GPLD1P80108 840 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GALNT1Q10472 559 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 MMRN1Q13201 1228 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 CBX2Q14781 532 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 POU6F1Q14863 301 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 MOXD1Q6UVY6 613 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 LACC1Q8IV20 430 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 LYSMD2Q8IV50 215 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 SLC4A11Q8NBS3 891 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 BEGAINQ9BUH8 593 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ABI2Q9NYB9 513 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 RBAKQ9NYW8 714 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 KCND2Q9NZV8 630 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 SLC17A6Q9P2U8 582 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ZMAT5Q9UDW3 170 aaKnown RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 CD300AQ9UGN4 299 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 MINPP1Q9UNW1 487 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 CDY2AQ9Y6F7 541 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 CDY1Q9Y6F8 540 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 A0A0X1KG70 313 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GOLGA8IPA6NC78 632 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 LRRIQ4A6NIV6 560 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GOLGA8JA6NMD2 632 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 TRIM77I1YAP6 450 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 MEIS2O14770 477 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 TPP1O14773 563 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GPC4O75487 556 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 CD40LGP29965 261 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 RPS6P62753 249 aaKnown RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 PPM1JQ5JR12 505 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 KRT39Q6A163 491 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 C16orf86Q6ZW13 317 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 XXYLT1Q8NBI6 393 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GIMAP1Q8WWP7 306 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 SLC7A3Q8WY07 619 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 FAM84AQ96KN4 292 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 ZNF560Q96MR9 790 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 MTMR12Q9C0I1 747 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 RPAP3Q9H6T3 665 aaPredicted RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 PLSCR3Q9NRY6 295 aa9.67□□□□□ -0.86
SF3A3-201ENST00000373019 GMPR2Q9P2T1 348 aaKnown RBP9.67□□□□□ -0.86
SF3A3-201ENST00000373019 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 VWA5AO00534 786 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 GLRA3O75311 464 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 CCNKO75909 580 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 MSL3P1P0C860 447 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 AXLP30530 894 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 PSME3P61289 254 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 GTF2IP78347 998 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 EIF2B5Q13144 721 aaKnown RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 DUSP7Q16829 419 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 GEN1Q17RS7 908 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 ASPRV1Q53RT3 343 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 Q5BKY6 102 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 CCNYL2Q5T2Q4 361 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 LIN9Q5TKA1 542 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 RSBN1Q5VWQ0 802 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 IDO2Q6ZQW0 420 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 CBWD2Q8IUF1 395 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 CCDC28AQ8IWP9 274 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 ANKRD13AQ8IZ07 590 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 UNC5BQ8IZJ1 945 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 LRRC47Q8N1G4 583 aaKnown RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 CADM2Q8N3J6 435 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TOR1AIP2Q8NFQ8 470 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 OR6Q1Q8NGQ2 317 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 YTHDF1Q9BYJ9 559 aaKnown RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 C2orf40Q9H1Z8 148 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 SLC22A2O15244 555 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 DDNO94850 711 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 CYP2C18P33260 490 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 ALDH7A1P49419 539 aaKnown RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 FSTL1Q12841 308 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TRAP1Q12931 704 aaKnown RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 DPY19L1Q2PZI1 675 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 IRAK1BP1Q5VVH5 260 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 PRR23CQ6ZRP0 262 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 BBS12Q6ZW61 710 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 STXBP4Q6ZWJ1 553 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 PHF13Q86YI8 300 aaPredicted RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 C12orf56Q8IXR9 622 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TNS4Q8IZW8 715 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TMEM246Q9BRR3 403 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 CYP26B1Q9NR63 512 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 AGPAT4Q9NRZ5 378 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 TCRBV5S1A1TA0A578 114 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 H0Y858 1186 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 NTRK1P04629 796 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 JUNP05412 331 aaKnown RBP9.66□□□□□ -0.86
SF3A3-201ENST00000373019 PKLRP30613 574 aa9.66□□□□□ -0.86
SF3A3-201ENST00000373019 MPP1Q00013 466 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms