RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 FETUBQ9UGM5 382 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 WARS2Q9UGM6 360 aaKnown RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 APPL1Q9UKG1 709 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 PSAT1Q9Y617 370 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 MRASO14807 208 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SIN3BO75182 1162 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 DUSP11O75319 330 aaKnown RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 LTA4HP09960 611 aaKnown RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ME2P23368 584 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 GMPRP36959 345 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 RGS4P49798 205 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 LIMK2P53671 638 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SH3BGRP55822 239 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 FKBP1BP68106 108 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 PRKD1Q15139 912 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 PPP1R15BQ5SWA1 713 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SLC22A9Q8IVM8 553 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 FBXO39Q8N4B4 442 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SNX19Q92543 992 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 GATA5Q9BWX5 397 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 CCDC90BQ9GZT6 254 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SEMA6AQ9H2E6 1030 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 BPIFA1Q9NP55 256 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 CASS4Q9NQ75 786 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 TRMT13Q9NUP7 481 aaKnown RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 WWOXQ9NZC7 414 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 PGAP2Q9UHJ9 254 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 RAP2CQ9Y3L5 183 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 hCG_2014768A0A024R1R8 64 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 C9IYK1 514 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 BTN3A1O00481 513 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 F2P00734 622 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 CYBBP04839 570 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 RPLP2P05387 115 aaKnown RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ATXN8OSP0DMR3 200 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ATP5F1P24539 256 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 HOXA11P31270 313 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 GJA9P57773 515 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 TAF10Q12962 218 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ITGA7Q13683 1181 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 FBXO48Q5FWF7 155 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SCIMPQ6UWF3 145 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 HPS6Q86YV9 775 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 TP53INP2Q8IXH6 220 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 PTGR2Q8N8N7 351 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 OR6Y1Q8NGX8 325 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 MMADHCQ9H3L0 296 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 GPBP1L1Q9HC44 474 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SYTL2Q9HCH5 934 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 UBA2Q9UBT2 640 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 EME2A4GXA9 379 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 MEIS3P2A8K0S8 358 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 TLR5O60602 858 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 NNMTP40261 264 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 DSC2Q02487 901 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 DUSP4Q13115 394 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 NFYCQ13952 458 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 ARL13AQ5H913 290 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 RALGPS1Q5JS13 557 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 MARK2Q7KZI7 788 aaKnown RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 NET1Q7Z628 596 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 DENND1CQ8IV53 801 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 HS6ST3Q8IZP7 471 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 TMEM40Q8WWA1 233 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 DCUN1D1Q96GG9 259 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 RIC8BQ9NVN3 520 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 MCM8Q9UJA3 840 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 PRRC2BQ5JSZ5 2229 aaKnown RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 SAC3D1A6NKF1 404 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 ZBTB42B2RXF5 422 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 E9PAM4 449 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 FAM72CH0Y354 149 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 KIF1CO43896 1103 aaKnown RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 ZBTB48P10074 688 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 FGFR3P22607 806 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 PIK3R1P27986 724 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 AIF1P55008 147 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 PLD1Q13393 1074 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 BFSP2Q13515 415 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 GRB14Q14449 540 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 FAM72AQ5TYM5 149 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 FAM72DQ6L9T8 149 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 MON1AQ86VX9 555 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 FAM72BQ86X60 149 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 BHLHE22Q8NFJ8 381 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 B3GALT6Q96L58 329 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 TEKT5Q96M29 485 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 SMOQ99835 787 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 FAM124BQ9H5Z6 455 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 VRTNQ9H8Y1 702 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 OLA1Q9NTK5 396 aaKnown RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 TAS2R13Q9NYV9 303 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 PDP2Q9P2J9 529 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 SORCS3Q9UPU3 1222 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 WASF2Q9Y6W5 498 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 PFDN1O60925 122 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 CABYRO75952 493 aa8.55□□□□□ -1.04
PTPRK-206ENST00000368215 RTN3O95197 1032 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-206ENST00000368215 TBX18O95935 607 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms