RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 C16orf59Q7L2K0 433 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 PARP8Q8N3A8 854 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 VCPIP1Q96JH7 1222 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 TMEM216Q9P0N5 145 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 MRPS7Q9Y2R9 242 aaKnown RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 RWDD3Q9Y3V2 267 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 TRDMT1O14717 391 aaKnown RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 SHBGP04278 402 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 SPIRE1Q08AE8 756 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 MTAPQ13126 283 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 TSEN2Q8NCE0 465 aaKnown RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 KBTBD8Q8NFY9 601 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 PHF10Q8WUB8 498 aaKnown RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 MROH8Q9H579 483 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 ZDHHC6Q9H6R6 413 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 TRMT13Q9NUP7 481 aaKnown RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 RTN3O95197 1032 aaPredicted RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 CHRNGP07510 517 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 DBTP11182 482 aaKnown RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 DPYSL3Q14195 570 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 STK40Q8N2I9 435 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 PCDH20Q8N6Y1 951 aaKnown RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 SPACA7Q96KW9 195 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 SERPINB11Q96P15 392 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 SLC38A2Q96QD8 506 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 ZFP14Q9HCL3 533 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 GMPPBQ9Y5P6 360 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 LGR5O75473 907 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 PTPN3P26045 913 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 GPR1P46091 355 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 ST3GAL1Q11201 340 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 ITGB3BPQ13352 177 aaPredicted RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 OLFML2AQ68BL7 652 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 NELL1Q92832 810 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 RAB21Q9UL25 225 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 PTPRZ1P23471 2315 aaPredicted RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 LIN7AO14910 233 aaPredicted RBP9.21□□□□□ -0.93
CSMD1-218ENST00000635120 PAEPP09466 180 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 TTMPQ5BVD1 217 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 SETD4Q9NVD3 440 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 GNPTGQ9UJJ9 305 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 PCDHA11Q9Y5I1 949 aa9.21□□□□□ -0.93
CSMD1-218ENST00000635120 KIF1AQ12756 1690 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 LACTBL1A8MY62 500 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 NTRK1P04629 796 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 VIL1P09327 827 aaKnown RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 ERCC2P18074 760 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 BRSK2Q8IWQ3 736 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 CCDC185Q8N715 623 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 AMER2Q8N7J2 671 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 AGBL3Q8NEM8 1001 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 GPR156Q8NFN8 814 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 Q96MT0 163 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 ASB2Q96Q27 587 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 AP3M1Q9Y2T2 418 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 TNPO3Q9Y5L0 923 aaKnown RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 A0A088AWK7 358 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 PLOD3O60568 738 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 ZNF10P21506 573 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 NEPROQ6NW34 567 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 SMYD1Q8NB12 490 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 CLIP3Q96DZ5 547 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 PHF11Q9UIL8 331 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 AKAP6Q13023 2319 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 ZNF24P17028 368 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 CAP2P40123 477 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 QPRTQ15274 297 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 RHBGQ9H310 441 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 CRNNQ9UBG3 495 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 FBXO10Q9UK96 956 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 KPNA3O00505 521 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 PQBP1O60828 265 aaKnown RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 NFIAQ12857 509 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 AP5B1Q2VPB7 878 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 PAGE2BQ5JRK9 111 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 FBXW8Q8N3Y1 598 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 VPS35Q96QK1 796 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 PANX3Q96QZ0 392 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 FAM126AQ9BYI3 521 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 PDGFDQ9GZP0 370 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 PCDHB5Q9Y5E4 795 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 CCDC166P0CW27 439 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 LY6KQ17RY6 165 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 POM121L1PQ3SYA9 428 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 TAF8Q7Z7C8 310 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 DSG4Q86SJ6 1040 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 AP3S1Q92572 193 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 REXO5Q96IC2 774 aaKnown RBP9.21□□□□□ -0.94
CSMD1-218ENST00000635120 GMCL1Q96IK5 515 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 C1QTNF7Q9BXJ2 289 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 MARCH2Q9P0N8 246 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 ERGIC3Q9Y282 383 aa9.21□□□□□ -0.94
CSMD1-218ENST00000635120 DIP2BQ9P265 1576 aa9.2□□□□□ -0.94
CSMD1-218ENST00000635120 A0A0B4J269 797 aa9.2□□□□□ -0.94
CSMD1-218ENST00000635120 UBE2QL1A1L167 161 aa9.2□□□□□ -0.94
CSMD1-218ENST00000635120 FAM92AA1XBS5 289 aa9.2□□□□□ -0.94
CSMD1-218ENST00000635120 ZBTB14O43829 449 aa9.2□□□□□ -0.94
CSMD1-218ENST00000635120 TMCC2O75069 709 aa9.2□□□□□ -0.94
CSMD1-218ENST00000635120 MARSP56192 900 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms