RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 SPATS2LQ9NUQ6 558 aaKnown RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SUCLA2Q9P2R7 463 aaPredicted RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 FBXO40Q9UH90 709 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 A4GNTQ9UNA3 340 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 ST3GAL5Q9UNP4 418 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 FNDC1Q4ZHG4 1894 aaPredicted RBP5.4□□□□□ -1.55
LINC00397-202ENST00000606785 EMSYQ7Z589 1322 aa5.4□□□□□ -1.55
LINC00397-202ENST00000606785 TCRBV7S3A2A0A539 114 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 GCATO75600 419 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 AKR1A1P14550 325 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 MPLP40238 635 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 CEBPZQ03701 1054 aaKnown RBP5.39□□□□□ -1.55
LINC00397-202ENST00000606785 FRG1Q14331 258 aaKnown RBP5.39□□□□□ -1.55
LINC00397-202ENST00000606785 PTPAQ15257 358 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 TAF11Q15544 211 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 EDRF1Q3B7T1 1238 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 SPATS1Q496A3 300 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 C10orf76Q5T2E6 689 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 TRIM72Q6ZMU5 477 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 MOB3CQ70IA8 216 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 RHPN2Q8IUC4 686 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 C16orf71Q8IYS4 520 aaPredicted RBP5.39□□□□□ -1.55
LINC00397-202ENST00000606785 GPATCH11Q8N954 259 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 LINC00476Q8WZB0 136 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 DVL3Q92997 716 aaPredicted RBP5.39□□□□□ -1.55
LINC00397-202ENST00000606785 CNDP2Q96KP4 475 aaKnown RBP5.39□□□□□ -1.55
LINC00397-202ENST00000606785 CCDC17Q96LX7 622 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 FRG2BQ96QU4 278 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 H2AFJQ9BTM1 129 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 GLIS2Q9BZE0 524 aaPredicted RBP5.39□□□□□ -1.55
LINC00397-202ENST00000606785 ALDH8A1Q9H2A2 487 aaPredicted RBP5.39□□□□□ -1.55
LINC00397-202ENST00000606785 ATP8A2Q9NTI2 1148 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 ARL8BQ9NVJ2 186 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 SYBUQ9NX95 663 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 SMPD4Q9NXE4 827 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 NLKQ9UBE8 527 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 FBXO4Q9UKT5 387 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 ICKQ9UPZ9 632 aa5.39□□□□□ -1.55
LINC00397-202ENST00000606785 REXO2Q9Y3B8 237 aaKnown RBP5.39□□□□□ -1.55
LINC00397-202ENST00000606785 A0A1W2PRG0 241 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TCRBV5S1A1TA0A578 114 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 H7C1Q1 480 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TAF4O00268 1085 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 ESRRBO95718 433 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 HEXAP06865 529 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 IRF1P10914 325 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 GABRB2P47870 512 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 AVPR1BP47901 424 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 PSMC6P62333 389 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 YWHAZP63104 245 aaKnown RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 ZBED6P86452 979 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 HOXA4Q00056 320 aaPredicted RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 EFEMP1Q12805 493 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TUBA3CQ13748 450 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 PFKFB3Q16875 520 aaPredicted RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TMEM266Q2M3C6 531 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 PLK5Q496M5 336 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 C5orf22Q49AR2 442 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 CC2D1BQ5T0F9 858 aaKnown RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 GKAP1Q5VSY0 366 aaPredicted RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 FAM171A1Q5VUB5 890 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TXNDC8Q6A555 127 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TUBA3EQ6PEY2 450 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TFAP2DQ7Z6R9 452 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 GPAT4Q86UL3 456 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TICAM1Q8IUC6 712 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 SCML4Q8N228 414 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 AMER2Q8N7J2 671 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 KCTD6Q8NC69 237 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 ZFPM2Q8WW38 1151 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 PSPC1Q8WXF1 523 aaKnown RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 IP6K1Q92551 441 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 GTF3C6Q969F1 213 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 ZNF764Q96H86 408 aaPredicted RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 PGAM5Q96HS1 289 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 C1orf74Q96LT6 269 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 BBC3Q96PG8 261 aaPredicted RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TEFMQ96QE5 360 aaKnown RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 IFT27Q9BW83 186 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 FRMD8Q9BZ67 464 aaPredicted RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 GRHL1Q9NZI5 618 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 MRPL15Q9P015 296 aaKnown RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 HAO1Q9UJM8 370 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 ZHX1Q9UKY1 873 aaPredicted RBP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 MTMR6Q9Y217 621 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 TNFSF13BQ9Y275 285 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.38□□□□□ -1.55
LINC00397-202ENST00000606785 PCDHGB5Q9Y5G0 923 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 SESN1Q9Y6P5 492 aa5.38□□□□□ -1.55
LINC00397-202ENST00000606785 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.37□□□□□ -1.55
LINC00397-202ENST00000606785 FAM170AA1A519 330 aa5.37□□□□□ -1.55
LINC00397-202ENST00000606785 TARSL2A2RTX5 802 aaKnown RBP5.37□□□□□ -1.55
LINC00397-202ENST00000606785 SNAP23O00161 211 aa5.37□□□□□ -1.55
LINC00397-202ENST00000606785 UBE2CO00762 179 aa5.37□□□□□ -1.55
LINC00397-202ENST00000606785 TP73O15350 636 aa5.37□□□□□ -1.55
LINC00397-202ENST00000606785 ADAM20O43506 726 aa5.37□□□□□ -1.55
LINC00397-202ENST00000606785 USP12O75317 370 aa5.37□□□□□ -1.55
LINC00397-202ENST00000606785 ENTPD3O75355 529 aa5.37□□□□□ -1.55
LINC00397-202ENST00000606785 CSPG5O95196 566 aa5.37□□□□□ -1.55
LINC00397-202ENST00000606785 IPO7O95373 1038 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms