RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 CTTNBP2NLQ9P2B4 639 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 THAP10Q9P2Z0 257 aaPredicted RBP9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 SLCO3A1Q9UIG8 710 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 FBXO4Q9UKT5 387 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 USP18Q9UMW8 372 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 AP4E1Q9UPM8 1137 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 DUSP10Q9Y6W6 482 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF292O60281 2723 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 ATG2BQ96BY7 2078 aa9.71□□□□□ -0.86
NPLOC4-219ENST00000576713 TMEM110-MUSTN1A8MSY1 372 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 EIF3CLB5ME19 914 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 K7ERQ8 282 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 RNF103O00237 685 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 CREB3O43889 395 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 CLDN11O75508 207 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 MTA2O94776 668 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 PROSCO94903 275 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 CD160O95971 181 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 MT-CO1P00395 513 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 ALBP02768 609 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 HOXB2P14652 356 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 GOT1P17174 413 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 GABRG2P18507 467 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 NTSR1P30989 418 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 L1CAMP32004 1257 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 ACVRL1P37023 503 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 MAGEA1P43355 309 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 PLK1P53350 603 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 COPAP53621 1224 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 CDH4P55283 916 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 ANO7Q6IWH7 933 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 RWDD4Q6NW29 188 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 SVOPQ8N4V2 548 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 ZBTB44Q8NCP5 570 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 NUDT8Q8WV74 236 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 TTC9Q92623 222 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 EIF3CQ99613 913 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 BAG1Q99933 345 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 IER2Q9BTL4 223 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 TPSD1Q9BZJ3 242 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 LACRTQ9GZZ8 138 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 MKRN2Q9H000 416 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 DHX35Q9H5Z1 703 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 ETNK2Q9NVF9 386 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 IMPACTQ9P2X3 320 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 PPARGC1AQ9UBK2 798 aaKnown RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 TRIM10Q9UDY6 481 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 DNAI1Q9UI46 699 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 INVSQ9Y283 1065 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 PAXBP1Q9Y5B6 917 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 PCDHA13Q9Y5I0 950 aa9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 EPN1Q9Y6I3 576 aaPredicted RBP9.7□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 TCRBV21S2A2A0A5A6 115 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 TTC34A8MYJ7 566 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 DCLK1O15075 740 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 SMAD6O43541 496 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 LILRB5O75023 590 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ZMPSTE24O75844 475 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 RGS9O75916 674 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 RHOCP08134 193 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 DLDP09622 509 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 IL4RP24394 825 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 PCK1P35558 622 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ARSEP51690 589 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ARF5P84085 180 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 EML5Q05BV3 1969 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF177Q13360 481 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 PIGHQ14442 188 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 MESDQ14696 234 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 EIF4HQ15056 248 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 TCEAL1Q15170 157 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ZNF528Q3MIS6 628 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ARL13BQ3SXY8 428 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ERMARDQ5T6L9 678 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 LRRC31Q6UY01 552 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 LINGO4Q6UY18 593 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 LEKR1Q6ZMV7 388 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ASCL5Q7RTU5 278 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 RASSF3Q86WH2 238 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 CACUL1Q86Y37 369 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 TMTC1Q8IUR5 882 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 CCDC170Q8IYT3 715 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 NPWQ8N729 165 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 WFIKKN2Q8TEU8 576 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 RFFLQ8WZ73 363 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 HSPH1Q92598 858 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 EXOC4Q96A65 974 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 VOPP1Q96AW1 172 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 TBC1D31Q96DN5 1066 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 ZFHX2Q9C0A1 2572 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 SUV39H2Q9H5I1 410 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 TMEM248Q9NWD8 314 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 CWC15Q9P013 229 aaKnown RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 KIAA1522Q9P206 1035 aaPredicted RBP9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 UVRAGQ9P2Y5 699 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 EBF1Q9UH73 591 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 IP6K2Q9UHH9 426 aa9.69□□□□□ -0.86
NPLOC4-219ENST00000576713 VPS51Q9UID3 782 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms