RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PCDHB9Q9Y5E1 797 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 KNL1Q8NG31 2342 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 CHD6Q8TD26 2715 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 GOLGA8CPA6NN73 597 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 RNF103O00237 685 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 SRGAP2O75044 1071 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 CNTN5O94779 1100 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 SRPRAP08240 638 aaKnown RBP16.01■□□□□ 0.15
USB1-208ENST00000563207 KRT7P08729 469 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 CCDC175P0C221 793 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 ATXN1LP0C7T5 689 aaKnown RBP16.01■□□□□ 0.15
USB1-208ENST00000563207 POM121L1PQ3SYA9 428 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 TTC31Q49AM3 519 aaPredicted RBP16.01■□□□□ 0.15
USB1-208ENST00000563207 ARTNQ5T4W7 220 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 MANEALQ5VSG8 457 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 DBX2Q6ZNG2 339 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 ZNF662Q6ZS27 426 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 POLNQ7Z5Q5 900 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 RNF10Q8N5U6 811 aaKnown RBP16.01■□□□□ 0.15
USB1-208ENST00000563207 BAHD1Q8TBE0 780 aaPredicted RBP16.01■□□□□ 0.15
USB1-208ENST00000563207 FRS2Q8WU20 508 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 UBE2Q2Q8WVN8 375 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 DESI2Q9BSY9 194 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 ZYG11BQ9C0D3 744 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 LACRTQ9GZZ8 138 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 FBRSQ9HAH7 460 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 SGK2Q9HBY8 427 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 MSRB2Q9Y3D2 182 aa16.01■□□□□ 0.15
USB1-208ENST00000563207 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16■□□□□ 0.15
USB1-208ENST00000563207 EDDM13A0A1B0GTR0 161 aa16■□□□□ 0.15
USB1-208ENST00000563207 TARSL2A2RTX5 802 aaKnown RBP16■□□□□ 0.15
USB1-208ENST00000563207 RCCD1A6NED2 376 aa16■□□□□ 0.15
USB1-208ENST00000563207 C10orf142B7Z368 130 aa16■□□□□ 0.15
USB1-208ENST00000563207 TAF4O00268 1085 aa16■□□□□ 0.15
USB1-208ENST00000563207 KRT86O43790 486 aa16■□□□□ 0.15
USB1-208ENST00000563207 LRIG2O94898 1065 aa16■□□□□ 0.15
USB1-208ENST00000563207 MOCS3O95396 460 aa16■□□□□ 0.15
USB1-208ENST00000563207 CER1O95813 267 aa16■□□□□ 0.15
USB1-208ENST00000563207 IL1BP01584 269 aa16■□□□□ 0.15
USB1-208ENST00000563207 CAPNS1P04632 268 aa16■□□□□ 0.15
USB1-208ENST00000563207 HCAR3P49019 387 aa16■□□□□ 0.15
USB1-208ENST00000563207 PPP2CBP62714 309 aa16■□□□□ 0.15
USB1-208ENST00000563207 PPP2CAP67775 309 aa16■□□□□ 0.15
USB1-208ENST00000563207 SLC25A11Q02978 314 aaKnown RBP16■□□□□ 0.15
USB1-208ENST00000563207 ZNF177Q13360 481 aaPredicted RBP16■□□□□ 0.15
USB1-208ENST00000563207 DPYSL2Q16555 572 aa16■□□□□ 0.15
USB1-208ENST00000563207 ALFQ53S48 1182 aa16■□□□□ 0.15
USB1-208ENST00000563207 LRRC38Q5VT99 294 aa16■□□□□ 0.15
USB1-208ENST00000563207 C11orf63Q6NUN7 778 aa16■□□□□ 0.15
USB1-208ENST00000563207 CYP4V2Q6ZWL3 525 aaPredicted RBP16■□□□□ 0.15
USB1-208ENST00000563207 USP30Q70CQ3 517 aa16■□□□□ 0.15
USB1-208ENST00000563207 SETD3Q86TU7 594 aaPredicted RBP16■□□□□ 0.15
USB1-208ENST00000563207 RHBDD1Q8TEB9 315 aa16■□□□□ 0.15
USB1-208ENST00000563207 TBC1D31Q96DN5 1066 aa16■□□□□ 0.15
USB1-208ENST00000563207 PEBP4Q96S96 227 aa16■□□□□ 0.15
USB1-208ENST00000563207 OMDQ99983 421 aa16■□□□□ 0.15
USB1-208ENST00000563207 FEM1AQ9BSK4 669 aa16■□□□□ 0.15
USB1-208ENST00000563207 SNRNP25Q9BV90 132 aaKnown RBP16■□□□□ 0.15
USB1-208ENST00000563207 CATSPERBQ9H7T0 1116 aa16■□□□□ 0.15
USB1-208ENST00000563207 CAAP1Q9H8G2 361 aa16■□□□□ 0.15
USB1-208ENST00000563207 NCKAP1Q9Y2A7 1128 aa16■□□□□ 0.15
USB1-208ENST00000563207 TBC1D30Q9Y2I9 924 aa16■□□□□ 0.15
USB1-208ENST00000563207 OR51B4Q9Y5P0 310 aa16■□□□□ 0.15
USB1-208ENST00000563207 NBEAQ8NFP9 2946 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 A0A1W2PPC4 97 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 SRRM3A6NNA2 597 aaPredicted RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 FGF10O15520 208 aaPredicted RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 MT-CO1P00395 513 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 ZNF883P0CG24 379 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 RHOQP17081 205 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 IL1R2P27930 398 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 DRD3P35462 400 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 CTSKP43235 329 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 SSR1P43307 286 aaKnown RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 GRIA4P48058 902 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 PLK1P53350 603 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 NAP1L1P55209 391 aaKnown RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 RNF219Q5W0B1 726 aaPredicted RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 ZNF783Q6ZMS7 281 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 KDM1BQ8NB78 822 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 OR14C36Q8NHC7 312 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 TPCN2Q8NHX9 752 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 ADAMTS14Q8WXS8 1223 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 ZCCHC14Q8WYQ9 949 aaKnown RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 PSMB7Q99436 277 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 DHX35Q9H5Z1 703 aaKnown RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 ZWILCHQ9H900 591 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 RCOR3Q9P2K3 495 aaPredicted RBP15.99■□□□□ 0.15
USB1-208ENST00000563207 ALG6Q9Y672 507 aa15.99■□□□□ 0.15
USB1-208ENST00000563207 FAM221BA6H8Z2 402 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 WASH4PA8MWX3 477 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 FAM72CH0Y354 149 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 K7ERQ8 282 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 CBX4O00257 560 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 BUB1BO60566 1050 aaPredicted RBP15.98■□□□□ 0.15
USB1-208ENST00000563207 SNAP91O60641 907 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 RNASEH1O60930 286 aaKnown RBP15.98■□□□□ 0.15
USB1-208ENST00000563207 RARAP10276 462 aa15.98■□□□□ 0.15
USB1-208ENST00000563207 MAPKAPK2P49137 400 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms