RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 TDGQ13569 410 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 C9orf64Q5T6V5 341 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 TMCO4Q5TGY1 634 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 MBLAC2Q68D91 279 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 LINGO4Q6UY18 593 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 BZW1Q7L1Q6 419 aaKnown RBP6.87□□□□□ -1.31
LINC00517-202ENST00000554257 CBARPQ8N350 705 aaPredicted RBP6.87□□□□□ -1.31
LINC00517-202ENST00000554257 NAT16Q8N8M0 369 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 TSEN2Q8NCE0 465 aaKnown RBP6.87□□□□□ -1.31
LINC00517-202ENST00000554257 WFIKKN2Q8TEU8 576 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 MSANTD3Q96H12 275 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 NUDCD1Q96RS6 583 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 VAT1Q99536 393 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 FUT8Q9BYC5 575 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 ARNT2Q9HBZ2 717 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 GLOD4Q9HC38 313 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 THG1LQ9NWX6 298 aaKnown RBP6.87□□□□□ -1.31
LINC00517-202ENST00000554257 DLGAP2Q9P1A6 1054 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 WHRNQ9P202 907 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 ZFC3H1O60293 1989 aaKnown RBP6.87□□□□□ -1.31
LINC00517-202ENST00000554257 TMEM131Q92545 1883 aa6.87□□□□□ -1.31
LINC00517-202ENST00000554257 SPDYE4A6NLX3 237 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 OPHN1O60890 802 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 GSRP00390 522 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 KRT14P02533 472 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 GM2AP17900 193 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 PSMB4P28070 264 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 MSS51Q4VC12 460 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 RALGPS2Q86X27 583 aaPredicted RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 OR2A12Q8NGT7 310 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 AENQ8WTP8 325 aaKnown RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 PHACTR1Q9C0D0 580 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 ETNK1Q9HBU6 452 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 HEBP1Q9NRV9 189 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 DNAJC17Q9NVM6 304 aaKnown RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 TRHDEQ9UKU6 1024 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 A0A1W2PQF6 199 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 ZNF189O75820 626 aaPredicted RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 ECEL1O95672 775 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 NFKB1P19838 968 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 OXCT1P55809 520 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 VSNL1P62760 191 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 ECT2LQ008S8 904 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 AP1B1Q10567 949 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 ERCC6LQ2NKX8 1250 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 ANO4Q32M45 955 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 EGFLAMQ63HQ2 1017 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 DARS2Q6PI48 645 aaKnown RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 RANBP10Q6VN20 620 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 HOOK3Q86VS8 718 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 ZNF557Q8N988 423 aaPredicted RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 PPM1EQ8WY54 764 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 BHMTQ93088 406 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 SLC25A51Q9H1U9 297 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 CASS4Q9NQ75 786 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 WASF2Q9Y6W5 498 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 CHRNB1P11230 501 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 H2AFXP16104 143 aaPredicted RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 DSC2Q02487 901 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 CDH18Q13634 790 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 GAS6Q14393 721 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 EIF4HQ15056 248 aaKnown RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 PARP6Q2NL67 630 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 C22orf39Q6P5X5 142 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 PKN3Q6P5Z2 889 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 LEKR1Q6ZMV7 388 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 RNF135Q8IUD6 432 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 MNS1Q8NEH6 495 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 CYB5D2Q8WUJ1 264 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 FAM129BQ96TA1 746 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 ACOX2Q99424 681 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 CPEB1Q9BZB8 566 aaKnown RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 SLCO3A1Q9UIG8 710 aa6.86□□□□□ -1.31
LINC00517-202ENST00000554257 FCF1Q9Y324 198 aaKnown RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 MTF2Q9Y483 593 aaPredicted RBP6.86□□□□□ -1.31
LINC00517-202ENST00000554257 TTC34A8MYJ7 566 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 DAPK3O43293 454 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 MTSS1O43312 755 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 HEXIM1O94992 359 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 KAT7O95251 611 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 AP2A1O95782 977 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 TDGF1P13385 188 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 COL9A1P20849 921 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ETFBP38117 255 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 GRIA1P42261 906 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 GRIA2P42262 883 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 IL12RB1P42701 662 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 MMP13P45452 471 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CARSP49589 748 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 TERF1P54274 439 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 KDSRQ06136 332 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 SLC20A2Q08357 652 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 ZNF234Q14588 700 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 RALGPS1Q5JS13 557 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 FNBP1LQ5T0N5 605 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CCDC181Q5TID7 509 aa6.85□□□□□ -1.31
LINC00517-202ENST00000554257 CWF19L1Q69YN2 538 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 HEATR6Q6AI08 1181 aaKnown RBP6.85□□□□□ -1.31
LINC00517-202ENST00000554257 GRAMD4Q6IC98 578 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms