RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 JOSD2Q8TAC2 188 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 RFFLQ8WZ73 363 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 NXPE2Q96DL1 559 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 PPP1R9BQ96SB3 815 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 PDCL3Q9H2J4 239 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 CLSTN2Q9H4D0 955 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 RRN3Q9NYV6 651 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 IL36AQ9UHA7 158 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 PNMA8BQ9ULN7 279 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 TPX2Q9ULW0 747 aaKnown RBP11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 STAP1Q9ULZ2 295 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 ITM2BQ9Y287 266 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 ILVBLA1L0T0 632 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 EPHB6O15197 1021 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 SPINT1O43278 529 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 ZIC2O95409 532 aaPredicted RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 MT-CO3P00414 261 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 F9P00740 461 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 PRNPP04156 253 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 UCHL3P15374 230 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 ITIH2P19823 946 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 HNRNPA2B1P22626 353 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 NUDT1P36639 197 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 ABL2P42684 1182 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 ABCG1P45844 678 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 SERPINH1P50454 418 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 CCNHP51946 323 aaPredicted RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 BPIFB4P59827 614 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 FZD2Q14332 565 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 CDO1Q16878 200 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 NEK5Q6P3R8 708 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 LRRC31Q6UY01 552 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 PARS2Q7L3T8 475 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 SLC30A5Q8TAD4 765 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 EPS8L1Q8TE68 723 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 KLF6Q99612 283 aaPredicted RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 HDAC8Q9BY41 377 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 SLC17A9Q9BYT1 436 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 TM6SF2Q9BZW4 377 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 NRSN2Q9GZP1 204 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 OSBPL2Q9H1P3 480 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 PRORYQ9H606 182 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 ATP13A1Q9HD20 1204 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 METTL5Q9NRN9 209 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 GPR27Q9NS67 375 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 TAB2Q9NYJ8 693 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 NOCTQ9UK39 431 aaKnown RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 NEU3Q9UQ49 428 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 CLCA2Q9UQC9 943 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 FARP1Q9Y4F1 1045 aaPredicted RBP11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 FADS3Q9Y5Q0 445 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 CFAP46Q8IYW2 2715 aa11.78□□□□□ -0.52
PRPF40B-212ENST00000551111 A0A1W2PNU3 283 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 IGLON5A6NGN9 336 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 F8VZ95 297 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 PES1O00541 588 aaKnown RBP11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 MAGEC1O60732 1142 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 C1QL1O75973 258 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 GFPT2O94808 682 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 ADRB3P13945 408 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 AKT2P31751 481 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 L1CAMP32004 1257 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 SCNN1AP37088 669 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 DAB2P98082 770 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 FMO1Q01740 532 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 GNA12Q03113 381 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 CCDC173Q0VFZ6 552 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 ILKQ13418 452 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 CCDC14Q49A88 953 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 CARD16Q5EG05 197 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 LRRC73Q5JTD7 316 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 MANEALQ5VSG8 457 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 CDCP2Q5VXM1 449 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 NYAP1Q6ZVC0 841 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 PTAR1Q7Z6K3 402 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 NLRP14Q86W24 1093 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 CCDC185Q8N715 623 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 GPT2Q8TD30 523 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 RXFP2Q8WXD0 754 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 APOLD1Q96LR9 279 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 HAPLN3Q96S86 360 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 PCDHB18PQ96TA0 734 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 HEPHQ9BQS7 1158 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 ZYG11BQ9C0D3 744 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 KLC2Q9H0B6 622 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 GANQ9H2C0 597 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 TCEAL2Q9H3H9 227 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 ZDHHC6Q9H6R6 413 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 DNAJC28Q9NX36 388 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 HECAQ9UBI9 543 aaPredicted RBP11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 DNAI1Q9UI46 699 aa11.77□□□□□ -0.53
PRPF40B-212ENST00000551111 SCN8AQ9UQD0 1980 aa11.76□□□□□ -0.53
PRPF40B-212ENST00000551111 PMS2P1A4D2B8 440 aa11.76□□□□□ -0.53
PRPF40B-212ENST00000551111 K7ESM1 405 aa11.76□□□□□ -0.53
PRPF40B-212ENST00000551111 OPA1O60313 960 aa11.76□□□□□ -0.53
PRPF40B-212ENST00000551111 MPOP05164 745 aa11.76□□□□□ -0.53
PRPF40B-212ENST00000551111 CDK4P11802 303 aa11.76□□□□□ -0.53
PRPF40B-212ENST00000551111 CKMT1AP12532 417 aa11.76□□□□□ -0.53
PRPF40B-212ENST00000551111 ITGB7P26010 798 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms