RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 HK2P52789 917 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 CCL23P55773 120 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 BST2Q10589 180 aaKnown RBP11.66□□□□□ -0.54
DDB1-224ENST00000545894 MBTPS1Q14703 1052 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 GPNMBQ14956 572 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 PPM1LQ5SGD2 360 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 SEL1L3Q68CR1 1132 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 LRRC8DQ7L1W4 858 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 FAM131BQ86XD5 332 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 PSTKQ8IV42 348 aaKnown RBP11.66□□□□□ -0.54
DDB1-224ENST00000545894 CPSF7Q8N684 471 aaKnown RBP11.66□□□□□ -0.54
DDB1-224ENST00000545894 NETO2Q8NC67 525 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 OR52K1Q8NGK4 314 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 OR6B3Q8NGW1 331 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 AGAP3Q96P47 875 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 ZNF696Q9H7X3 374 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 OXSMQ9NWU1 459 aa11.66□□□□□ -0.54
DDB1-224ENST00000545894 NEMP1O14524 444 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 PPARGP37231 505 aaPredicted RBP11.65□□□□□ -0.54
DDB1-224ENST00000545894 HSPA13P48723 471 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 RPL14P50914 215 aaKnown RBP11.65□□□□□ -0.54
DDB1-224ENST00000545894 BCAT1P54687 386 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 FRG1Q14331 258 aaKnown RBP11.65□□□□□ -0.54
DDB1-224ENST00000545894 DLG2Q15700 870 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 LSM12Q3MHD2 195 aaKnown RBP11.65□□□□□ -0.54
DDB1-224ENST00000545894 NADK2Q4G0N4 442 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 TMEM259Q4ZIN3 620 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 HSP90AA5PQ58FG0 334 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 PID1Q7Z2X4 250 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 TMEM135Q86UB9 458 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 LCA5Q86VQ0 697 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 UNC93AQ86WB7 457 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 TICAM1Q8IUC6 712 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 PGAM4Q8N0Y7 254 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 ANKRD52Q8NB46 1076 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 SLC7A14Q8TBB6 771 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 RNF139Q8WU17 664 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 DLG3Q92796 817 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 SCLYQ96I15 445 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 CNBD2Q96M20 576 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 PGLYRP2Q96PD5 576 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 AGAP2Q99490 1192 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 LPIN3Q9BQK8 851 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 PRDM12Q9H4Q4 367 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 CAB39LQ9H9S4 337 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 BFARQ9NZS9 450 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 VANGL2Q9ULK5 521 aa11.65□□□□□ -0.54
DDB1-224ENST00000545894 TIMM44O43615 452 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 TMCC1O94876 653 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 TIMP1P01033 207 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 APOA4P06727 396 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 CHRNGP07510 517 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 ADORA2BP29275 332 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 ADSLP30566 484 aaPredicted RBP11.65□□□□□ -0.55
DDB1-224ENST00000545894 RANBP1P43487 201 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 ACADSBP45954 432 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 SULT1E1P49888 294 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 MYBPC1Q00872 1141 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 OLIG2Q13516 323 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 LPIN1Q14693 890 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 FBXO47Q5MNV8 452 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 KLHDC10Q6PID8 442 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 METTL25Q8N6Q8 603 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 BHLHE22Q8NFJ8 381 aaPredicted RBP11.65□□□□□ -0.55
DDB1-224ENST00000545894 KBTBD7Q8WVZ9 684 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 RCN3Q96D15 328 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 DRC3Q9H069 523 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 DPEP3Q9H4B8 488 aa11.65□□□□□ -0.55
DDB1-224ENST00000545894 AGO3Q9H9G7 860 aaKnown RBP11.65□□□□□ -0.55
DDB1-224ENST00000545894 COPS7BQ9H9Q2 264 aaPredicted RBP11.65□□□□□ -0.55
DDB1-224ENST00000545894 KLHL8Q9P2G9 620 aaPredicted RBP11.65□□□□□ -0.55
DDB1-224ENST00000545894 EVPLQ92817 2033 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 ZCWPW2A0A1B0GU75 182 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 CCDC160A6NGH7 325 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 PPEF2O14830 753 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 CFLARO15519 480 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 TSPAN1O60635 241 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 NBNO60934 754 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 ME2P23368 584 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 EPHA3P29320 983 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 MATKP42679 507 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 RPL34P49207 117 aaKnown RBP11.64□□□□□ -0.55
DDB1-224ENST00000545894 CSE1LP55060 971 aaKnown RBP11.64□□□□□ -0.55
DDB1-224ENST00000545894 PKNOX1P55347 436 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 MPP3Q13368 585 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 CEACAM7Q14002 265 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 HERC3Q15034 1050 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 TBC1D25Q3MII6 688 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 SLC25A52Q3SY17 297 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 SH2D4BQ5SQS7 431 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 LIPMQ5VYY2 423 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 ZYG11AQ6WRX3 759 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 RDH11Q8TC12 318 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 DDI1Q8WTU0 396 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 STON2Q8WXE9 905 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 DPF3Q92784 378 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 PPP1R36Q96LQ0 422 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 ACE2Q9BYF1 805 aaPredicted RBP11.64□□□□□ -0.55
DDB1-224ENST00000545894 GRIP2Q9C0E4 1043 aa11.64□□□□□ -0.55
DDB1-224ENST00000545894 RBM38Q9H0Z9 239 aaKnown RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms