RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 DENND6BQ8NEG7 585 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 UBA3Q8TBC4 463 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 JPH3Q8WXH2 748 aaPredicted RBP17.85■□□□□ 0.45
PVT1-220ENST00000524165 ASB12Q8WXK4 309 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 ABHD17AQ96GS6 310 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 TMX3Q96JJ7 454 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 BTN2A3PQ96KV6 586 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 FEM1AQ9BSK4 669 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 C1QTNF2Q9BXJ5 285 aa17.85■□□□□ 0.45
PVT1-220ENST00000524165 PNMA8BQ9ULN7 279 aaPredicted RBP17.85■□□□□ 0.45
PVT1-220ENST00000524165 CSMD1Q96PZ7 3565 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 ZNF891A8MT65 544 aaPredicted RBP17.84■□□□□ 0.45
PVT1-220ENST00000524165 PDXKO00764 312 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 GABBR2O75899 941 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 FYNP06241 537 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 KRT7P08729 469 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 SRCP12931 536 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 LIFP15018 202 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 NEK3P51956 506 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 CEBPZQ03701 1054 aaKnown RBP17.84■□□□□ 0.45
PVT1-220ENST00000524165 ENPEPQ07075 957 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 SGCGQ13326 291 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 SLC39A14Q15043 492 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 CAPRIN2Q6IMN6 1127 aaKnown RBP17.84■□□□□ 0.45
PVT1-220ENST00000524165 IQUBQ8NA54 791 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 KCTD10Q9H3F6 313 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 DOLKQ9UPQ8 538 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 OR51B4Q9Y5P0 310 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 FADS3Q9Y5Q0 445 aa17.84■□□□□ 0.45
PVT1-220ENST00000524165 OTOGQ6ZRI0 2925 aa17.83■□□□□ 0.45
PVT1-220ENST00000524165 PRR19A6NJB7 356 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 RNF103O00237 685 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 CAPN5O15484 640 aaPredicted RBP17.83■□□□□ 0.44
PVT1-220ENST00000524165 AP1G1O43747 822 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 VPS4BO75351 444 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 TRIM49P0CI25 452 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 TRIM49CP0CI26 452 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 UQCRFS1P47985 274 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 MLLT10P55197 1068 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 ELOCQ15369 112 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 RABGAP1LQ5R372 815 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 FAXCQ5TGI0 409 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 INTS8Q75QN2 995 aaKnown RBP17.83■□□□□ 0.44
PVT1-220ENST00000524165 CIR1Q86X95 450 aaPredicted RBP17.83■□□□□ 0.44
PVT1-220ENST00000524165 CCNJLQ8IV13 435 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 SLITRK4Q8IW52 837 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 IL22RA1Q8N6P7 574 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 PCDH19Q8TAB3 1148 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 SLC35F5Q8WV83 523 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 DHX58Q96C10 678 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 PRMT1Q99873 361 aaKnown RBP17.83■□□□□ 0.44
PVT1-220ENST00000524165 MAGEF1Q9HAY2 307 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 TMEM8AQ9HCN3 771 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 SIRPGQ9P1W8 387 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 VPS28Q9UK41 221 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 APPL1Q9UKG1 709 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 VPS4AQ9UN37 437 aa17.83■□□□□ 0.44
PVT1-220ENST00000524165 AGRPO00253 132 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 O00370 1275 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 FBXO21O94952 628 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 ALPIP09923 528 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 ADRB3P13945 408 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 DCTP40126 519 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 YPEL5P62699 121 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 PPARDQ03181 441 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 ARSIQ5FYB1 569 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 PMF1Q6P1K2 205 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 GALNT11Q8NCW6 608 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 OR52K2Q8NGK3 314 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 CLEC4CQ8WTT0 213 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 APOBEC4Q8WW27 367 aaKnown RBP17.82■□□□□ 0.44
PVT1-220ENST00000524165 BLZF1Q9H2G9 400 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 AKAP7Q9P0M2 348 aaPredicted RBP17.82■□□□□ 0.44
PVT1-220ENST00000524165 IL36AQ9UHA7 158 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 RNF215Q9Y6U7 377 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 HIVEP3Q5T1R4 2406 aa17.82■□□□□ 0.44
PVT1-220ENST00000524165 SETD2Q9BYW2 2564 aaPredicted RBP17.82■□□□□ 0.44
PVT1-220ENST00000524165 LRP4O75096 1905 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 A1L4Q6 167 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 CELA2BP08218 269 aaPredicted RBP17.81■□□□□ 0.44
PVT1-220ENST00000524165 VDRP11473 427 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 CD19P15391 556 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 PNLIPP16233 465 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 CASP1P29466 404 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 RGS7P49802 495 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 BLKP51451 505 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 ZC3H12AQ5D1E8 599 aaKnown RBP17.81■□□□□ 0.44
PVT1-220ENST00000524165 KRT39Q6A163 491 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 MACC1Q6ZN28 852 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 TAC4Q86UU9 113 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 ATP11CQ8NB49 1132 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 CHST14Q8NCH0 376 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 SEMA4DQ92854 862 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 SLC45A3Q96JT2 553 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 MMRN2Q9H8L6 949 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 KIAA1257Q9ULG3 409 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 GPR34Q9UPC5 381 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 PCDHGA3Q9Y5H0 932 aa17.81■□□□□ 0.44
PVT1-220ENST00000524165 IGLON5A6NGN9 336 aa17.8■□□□□ 0.44
PVT1-220ENST00000524165 KCNU1A8MYU2 1149 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms