RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ARRDC2Q8TBH0 407 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 NSMCE1Q8WV22 266 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 PITPNM3Q9BZ71 974 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 PDFQ9HBH1 243 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 ALG13Q9NP73 1137 aaKnown RBP17.1■□□□□ 0.33
SREK1-212ENST00000522912 C20orf96Q9NUD7 363 aaPredicted RBP17.1■□□□□ 0.33
SREK1-212ENST00000522912 SMPD4Q9NXE4 827 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 CXXC1Q9P0U4 656 aaPredicted RBP17.1■□□□□ 0.33
SREK1-212ENST00000522912 MAFFQ9ULX9 164 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 USP15Q9Y4E8 981 aaPredicted RBP17.1■□□□□ 0.33
SREK1-212ENST00000522912 TGM5O43548 720 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 HOXD9P28356 352 aaPredicted RBP17.09■□□□□ 0.33
SREK1-212ENST00000522912 GNA12Q03113 381 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 RABGAP1LQ5R372 815 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 ADGRF1Q5T601 910 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 GRTP1Q5TC63 336 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 CCDC117Q8IWD4 279 aaPredicted RBP17.09■□□□□ 0.33
SREK1-212ENST00000522912 KLHL23Q8NBE8 558 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 TADA1Q96BN2 335 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 MAGEH1Q9H213 219 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 RETREG1Q9H6L5 497 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 ATP13A1Q9HD20 1204 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 TSPAN3O60637 253 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 GJB3O75712 270 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 TOP3BO95985 862 aaKnown RBP17.09■□□□□ 0.33
SREK1-212ENST00000522912 MBL2P11226 248 aaPredicted RBP17.09■□□□□ 0.33
SREK1-212ENST00000522912 CRHR1P34998 444 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 POTEHQ6S545 545 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 SPATA21Q7Z572 469 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 YTHDF3Q7Z739 585 aaKnown RBP17.09■□□□□ 0.33
SREK1-212ENST00000522912 STRA8Q7Z7C7 330 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 SLC25A41Q8N5S1 370 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 PTPRN2Q92932 1015 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 BADQ92934 168 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
SREK1-212ENST00000522912 ARNT2Q9HBZ2 717 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 TRPC7Q9HCX4 862 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 IARS2Q9NSE4 1012 aaKnown RBP17.09■□□□□ 0.33
SREK1-212ENST00000522912 PHTF1Q9UMS5 762 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 TCAF1Q9Y4C2 921 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 ACTL7AQ9Y615 435 aa17.09■□□□□ 0.33
SREK1-212ENST00000522912 GOLGA8TH3BQL2 631 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 TPP1O14773 563 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 MUSKO15146 869 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 EDF1O60869 148 aaKnown RBP17.08■□□□□ 0.33
SREK1-212ENST00000522912 CLDN11O75508 207 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 CREMQ03060 361 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 PPIGQ13427 754 aaKnown RBP eCLIP17.08■□□□□ 0.332e-8■■□□□ 12.2
SREK1-212ENST00000522912 TMCO4Q5TGY1 634 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 TXNDC8Q6A555 127 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 ITIH5Q86UX2 942 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 ARL14EPQ8N8R7 260 aaPredicted RBP17.08■□□□□ 0.33
SREK1-212ENST00000522912 ANKS4BQ8N8V4 417 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 ADAMTS19Q8TE59 1207 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 ATP2A3Q93084 1043 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 RBBP8Q99708 897 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 IQCGQ9H095 443 aaKnown RBP17.08■□□□□ 0.33
SREK1-212ENST00000522912 VPS45Q9NRW7 570 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 TXNDC16Q9P2K2 825 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 PRKAG3Q9UGI9 489 aa17.08■□□□□ 0.33
SREK1-212ENST00000522912 KIAA0754O94854 1291 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 CXCL14O95715 111 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 SERPINB4P48594 390 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 CORO7P57737 925 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 SMAD3P84022 425 aaKnown RBP17.08■□□□□ 0.32
SREK1-212ENST00000522912 ZXDBP98169 803 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 RNF187Q5TA31 235 aaPredicted RBP17.08■□□□□ 0.32
SREK1-212ENST00000522912 ESRP1Q6NXG1 681 aaKnown RBP17.08■□□□□ 0.32
SREK1-212ENST00000522912 LILRA6Q6PI73 481 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 UBE2Q1Q7Z7E8 422 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 PPHLN1Q8NEY8 458 aaKnown RBP17.08■□□□□ 0.32
SREK1-212ENST00000522912 ACMSDQ8TDX5 336 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 MCMBPQ9BTE3 642 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 ZBED2Q9BTP6 218 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 MRM3Q9HC36 420 aaKnown RBP17.08■□□□□ 0.32
SREK1-212ENST00000522912 SLC2A6Q9UGQ3 507 aa17.08■□□□□ 0.32
SREK1-212ENST00000522912 SCAMP3O14828 347 aaKnown RBP17.07■□□□□ 0.32
SREK1-212ENST00000522912 GLDCP23378 1020 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 ABCG1P45844 678 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 PDE1BQ01064 536 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 MSLNQ13421 630 aaPredicted RBP17.07■□□□□ 0.32
SREK1-212ENST00000522912 PDE1CQ14123 709 aaPredicted RBP17.07■□□□□ 0.32
SREK1-212ENST00000522912 PDPK2PQ6A1A2 396 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 IL31Q6EBC2 164 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 CHST9Q7L1S5 443 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 DCLK2Q8N568 766 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 ARMC2Q8NEN0 867 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 PTCD2Q8WV60 388 aaKnown RBP17.07■□□□□ 0.32
SREK1-212ENST00000522912 GRAMD1AQ96CP6 724 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 ZNF599Q96NL3 588 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 MANSC1Q9H8J5 431 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 STK39Q9UEW8 545 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 STOML2Q9UJZ1 356 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 STARD13Q9Y3M8 1113 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 INSL6Q9Y581 213 aa17.07■□□□□ 0.32
SREK1-212ENST00000522912 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.06■□□□□ 0.32
SREK1-212ENST00000522912 CCT8L1PA6NM43 557 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 GREM1O60565 184 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 OLFM2O95897 454 aa17.06■□□□□ 0.32
SREK1-212ENST00000522912 ARNTP27540 789 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms