RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 MAGEB5Q9BZ81 275 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 COMMD8Q9NX08 183 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 ARHGEF38Q9NXL2 777 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 ARMCX1Q9P291 453 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 TMCO1Q9UM00 188 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 PCDHB5Q9Y5E4 795 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 A0A088AWK7 358 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 SLC22A2O15244 555 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 MFSD11O43934 449 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 H2AFYO75367 372 aaKnown RBP18.61■□□□□ 0.57
SDC2-202ENST00000518385 SERPINE1P05121 402 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 ERCC2P18074 760 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 SLC5A3P53794 718 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 SLC39A12Q504Y0 691 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 VARS2Q5ST30 1063 aaKnown RBP18.61■□□□□ 0.57
SDC2-202ENST00000518385 FAM171A1Q5VUB5 890 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 FOXB2Q5VYV0 432 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 ZNF280DQ6N043 979 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 FUT10Q6P4F1 479 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 MON1AQ86VX9 555 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 RASSF3Q86WH2 238 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 DRAXINQ8NBI3 349 aaPredicted RBP18.61■□□□□ 0.57
SDC2-202ENST00000518385 SMOC2Q9H3U7 446 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 SCML2Q9UQR0 700 aa18.61■□□□□ 0.57
SDC2-202ENST00000518385 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.61■□□□□ 0.57
SDC2-202ENST00000518385 H7C4K7 107 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 ALDH1A2O94788 518 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 EFEMP2O95967 443 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 APRTP07741 180 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 PBX3P40426 434 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 RABGGTBP53611 331 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 PPP2R5DQ14738 602 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 CNPY1Q3B7I2 92 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 HSF5Q4G112 596 aaPredicted RBP18.6■□□□□ 0.57
SDC2-202ENST00000518385 RABGAP1LQ5R372 815 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 TMEM240Q5SV17 173 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 FAM117BQ6P1L5 589 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 ARHGAP22Q7Z5H3 698 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 TAC4Q86UU9 113 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 NDUFAF2Q8N183 169 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 NUP93Q8N1F7 819 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 SREK1Q8WXA9 508 aaKnown RBP18.6■□□□□ 0.57
SDC2-202ENST00000518385 EDEM1Q92611 657 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 VAT1Q99536 393 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 HTATIP2Q9BUP3 242 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 TKTL2Q9H0I9 626 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 IL37Q9NZH6 218 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 C6orf203Q9P0P8 240 aaPredicted RBP18.6■□□□□ 0.57
SDC2-202ENST00000518385 OR12D3Q9UGF7 316 aa18.6■□□□□ 0.57
SDC2-202ENST00000518385 PRPF19Q9UMS4 504 aaKnown RBP18.6■□□□□ 0.57
SDC2-202ENST00000518385 PRR5-ARHGAP8B1AHC4 643 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 IRAK2O43187 625 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 ARHGAP8P85298 464 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 KDSRQ06136 332 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 LSAMPQ13449 338 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 CDHR3Q6ZTQ4 885 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 CAND1Q86VP6 1230 aaKnown RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 TMEM173Q86WV6 379 aaPredicted RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 ADAM32Q8TC27 787 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 C2orf15Q8WU43 125 aaKnown RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 BCL7CQ8WUZ0 217 aaPredicted RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 RNF34Q969K3 372 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 P2RY11Q96G91 374 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 C12orf65Q9H3J6 166 aaKnown RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 PRDM12Q9H4Q4 367 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 PIDD1Q9HB75 910 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 MOCS1Q9NZB8 636 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 IGSF9Q9P2J2 1179 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 MID2Q9UJV3 735 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 MAD1L1Q9Y6D9 718 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 METTL18O95568 372 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 BAG2O95816 211 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 SLC2A3P11169 496 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 VAV1P15498 845 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 ADSLP30566 484 aaPredicted RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 CCR1P32246 355 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 HSPA13P48723 471 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 NRLP54845 237 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 COG7P83436 770 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 NRG1Q02297 640 aaPredicted RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 PPIDQ08752 370 aaKnown RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 BTG3Q14201 252 aaPredicted RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 ADRM1Q16186 407 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 CTXN3Q4LDR2 81 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 HSP90AA5PQ58FG0 334 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 UNC5AQ6ZN44 842 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 SETD3Q86TU7 594 aaPredicted RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 TAB3Q8N5C8 712 aaPredicted RBP18.59■□□□□ 0.57
SDC2-202ENST00000518385 LZTR1Q8N653 840 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 HDAC11Q96DB2 347 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 IGSF21Q96ID5 467 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 SIGLEC10Q96LC7 697 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 CEP295NLQ96MC4 621 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 TRHDEQ9UKU6 1024 aa18.59■□□□□ 0.57
SDC2-202ENST00000518385 VWA8A3KMH1 1905 aa18.58■□□□□ 0.57
SDC2-202ENST00000518385 MKI67P46013 3256 aaKnown RBP18.58■□□□□ 0.57
SDC2-202ENST00000518385 CARNS1A5YM72 827 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 EIF4E1BA6NMX2 242 aaKnown RBP18.58■□□□□ 0.56
SDC2-202ENST00000518385 ZBBXA8MT70 800 aa18.58■□□□□ 0.56
SDC2-202ENST00000518385 FGF10O15520 208 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms