RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 FBXL19Q6PCT2 694 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 CACTIN-AS1Q8N1I8 211 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 SLC30A5Q8TAD4 765 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 NTAN1Q96AB6 310 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 SCUBE2Q9NQ36 999 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 ANO10Q9NW15 660 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 TMEM248Q9NWD8 314 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 ADAM22Q9P0K1 906 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 HS3ST3A1Q9Y663 406 aa20.35■□□□□ 0.85
UBE2D3-220ENST00000505307 FAM170AA1A519 330 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 CALB1P05937 261 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 ADRB3P13945 408 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 KLK7P49862 253 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 CCNHP51946 323 aaPredicted RBP20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 COPB1P53618 953 aaKnown RBP20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 ZNF211Q13398 564 aaPredicted RBP20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 SYCP1Q15431 976 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 C15orf59Q2T9L4 293 aaPredicted RBP20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 RWDD4Q6NW29 188 aaKnown RBP20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 SASS6Q6UVJ0 657 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 ABI3BPQ7Z7G0 1075 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 NLRP14Q86W24 1093 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 PHF13Q86YI8 300 aaPredicted RBP20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 MARCH9Q86YJ5 346 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 NEK11Q8NG66 645 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 RAB7BQ96AH8 199 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 TBC1D31Q96DN5 1066 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 PCMTD1Q96MG8 357 aaPredicted RBP20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 GBP4Q96PP9 640 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 LIMA1Q9UHB6 759 aaKnown RBP20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 CA5BQ9Y2D0 317 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 RAXQ9Y2V3 346 aa20.34■□□□□ 0.85
UBE2D3-220ENST00000505307 LRRC10BA6NIK2 292 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 A6NNZ2 444 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 LGALS16A8MUM7 142 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 EPHB6O15197 1021 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 PLEKP08567 350 aaPredicted RBP20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 ACP1P24666 158 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 MYL5Q02045 173 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 PTP4A2Q12974 167 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 POLD3Q15054 466 aaPredicted RBP20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 C19orf48Q6RUI8 117 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 C3orf20Q8ND61 904 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 JOSD2Q8TAC2 188 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 GPT2Q8TD30 523 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 FAM172AQ8WUF8 416 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 KLK6Q92876 244 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 ARHGEF2Q92974 986 aaKnown RBP20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 NXPE2Q96DL1 559 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 SELENOOQ9BVL4 669 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 SLC17A9Q9BYT1 436 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 HECAQ9UBI9 543 aaPredicted RBP20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 ZFR2Q9UPR6 939 aaKnown RBP20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 FCF1Q9Y324 198 aaKnown RBP20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 FADS3Q9Y5Q0 445 aa20.33■□□□□ 0.85
UBE2D3-220ENST00000505307 ARID1BQ8NFD5 2236 aaPredicted RBP20.33■□□□□ 0.84
UBE2D3-220ENST00000505307 ZSCAN5CA6NGD5 496 aaPredicted RBP20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 SIGLEC16A6NMB1 481 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 TSPAN6O43657 245 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 RAMP2O60895 175 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 LRIG2O94898 1065 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 CD160O95971 181 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 GSRP00390 522 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 HOXB3P14651 431 aaPredicted RBP20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 GPD1P21695 349 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 DGKAP23743 735 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 ACVRL1P37023 503 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 HDAC4P56524 1084 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 SNRPD1P62314 119 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 E2F1Q01094 437 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 CLEC16AQ2KHT3 1053 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 PROX2Q3B8N5 592 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 SEL1L3Q68CR1 1132 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 SLC25A45Q8N413 288 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 OR13H1Q8NG92 308 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 OR4C6Q8NH72 309 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 RFFLQ8WZ73 363 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 ARHGEF26Q96DR7 871 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 PCDHB18PQ96TA0 734 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 MYOCQ99972 504 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 CALN1Q9BXU9 219 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 OSBPL1AQ9BXW6 950 aa20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 URB1O60287 2271 aaKnown RBP20.32■□□□□ 0.84
UBE2D3-220ENST00000505307 DOCK9Q9BZ29 2069 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 ANKRD62A6NC57 917 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 NEMP2A6NFY4 417 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 GOLGA6L22H0YM25 854 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 RNF103O00237 685 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 SDC3O75056 442 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 POP4O95707 220 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 CCDC172P0C7W6 258 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 ALPPL2P10696 532 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 CDK11BP21127 795 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 RFC1P35251 1148 aaPredicted RBP20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 UBXN1Q04323 297 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 C1QBPQ07021 282 aaKnown RBP20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 RAB6CQ53S08 254 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 ZNF805Q5CZA5 627 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 HES3Q5TGS1 186 aa20.31■□□□□ 0.84
UBE2D3-220ENST00000505307 WDR59Q6PJI9 974 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms