RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 ZNF662Q6ZS27 426 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 USP30Q70CQ3 517 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 NT5DC3Q86UY8 548 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 FAM124AQ86V42 546 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 LRRC49Q8IUZ0 686 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 TMEFF1Q8IYR6 380 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 RCOR2Q8IZ40 523 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 SYCE1Q8N0S2 351 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 HDDC3Q8N4P3 179 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 AADATQ8N5Z0 425 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 PLD5Q8N7P1 536 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 NUP205Q92621 2012 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 VOPP1Q96AW1 172 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 ZNF830Q96NB3 372 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-208ENST00000494334 BTBD1Q9H0C5 482 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 NEUROG2Q9H2A3 272 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 IL36AQ9UHA7 158 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 AMFRQ9UKV5 643 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 NCKAP1Q9Y2A7 1128 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 CAPN6Q9Y6Q1 641 aa13.77□□□□□ -0.21
COL1A1-208ENST00000494334 CCDC66A2RUB6 948 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 C1QTNF3-AMACRE9PGA6 284 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 APOL1O14791 398 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 NDUFS2O75306 463 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 LEFTY1O75610 366 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 RNASEH2AO75792 299 aaKnown RBP13.76□□□□□ -0.21
COL1A1-208ENST00000494334 PRNPP04156 253 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 KRT10P13645 584 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 GKP32189 559 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 DRD3P35462 400 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 GARSP41250 739 aaKnown RBP13.76□□□□□ -0.21
COL1A1-208ENST00000494334 PEX5P50542 639 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 SLC10A7Q0GE19 358 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 GALNT2Q10471 571 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 SFSWAPQ12872 951 aaKnown RBP13.76□□□□□ -0.21
COL1A1-208ENST00000494334 RFTN1Q14699 578 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-208ENST00000494334 LLGL1Q15334 1064 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 ELF2Q15723 593 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 MYLK3Q32MK0 819 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 POM121L1PQ3SYA9 428 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 SPDYCQ5MJ68 293 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 ATXN7L2Q5T6C5 722 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-208ENST00000494334 LAIR1Q6GTX8 287 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 SPOCD1Q6ZMY3 1216 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 LPCAT2Q7L5N7 544 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 PEX26Q7Z412 305 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 RFX6Q8HWS3 928 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 RYBPQ8N488 228 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-208ENST00000494334 ATPAF2Q8N5M1 289 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 OR6K2Q8NGY2 324 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 EXD1Q8NHP7 514 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-208ENST00000494334 GANCQ8TET4 914 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 FAM131CQ96AQ9 280 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 LOXL4Q96JB6 756 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 ZNF599Q96NL3 588 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 OMDQ99983 421 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 GPR174Q9BXC1 333 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 KCNF1Q9H3M0 494 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 DTLQ9NZJ0 730 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 LHX3Q9UBR4 397 aa13.76□□□□□ -0.21
COL1A1-208ENST00000494334 hCG_1818297A0A087WSY0 165 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 PLK4O00444 970 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 KPNA3O00505 521 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 POP4O95707 220 aaKnown RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 FTCDO95954 541 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 IGSF6O95976 241 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 PTMAP06454 111 aaKnown RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 RETP07949 1114 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 ZFXP17010 805 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 PTGER3P43115 390 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 RGRP47804 291 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 DHPSP49366 369 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 RWDD2BP57060 319 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 ADCY2Q08462 1091 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 LBRQ14739 615 aaKnown RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 TFDP3Q5H9I0 405 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 TMCO4Q5TGY1 634 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 KAZNQ674X7 775 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 SLC41A1Q8IVJ1 513 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 TSEN2Q8NCE0 465 aaKnown RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 GRIN3AQ8TCU5 1115 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 LRRN4Q8WUT4 740 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 ARRDC3Q96B67 414 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 ZNF419Q96HQ0 510 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 RBM41Q96IZ5 413 aaKnown RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 EXOC2Q96KP1 924 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 GDAP1L1Q96MZ0 367 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 CINPQ9BW66 212 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 ZDHHC6Q9H6R6 413 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 SGK2Q9HBY8 427 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 LZTFL1Q9NQ48 299 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 EVLQ9UI08 416 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 GMEB2Q9UKD1 530 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 FZD4Q9ULV1 537 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 PACSIN2Q9UNF0 486 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-208ENST00000494334 PPP2R2CQ9Y2T4 447 aa13.75□□□□□ -0.21
COL1A1-208ENST00000494334 ABCA7Q8IZY2 2146 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms