RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 CCDC122Q5T0U0 273 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 ERMARDQ5T6L9 678 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 N4BP2L1Q5TBK1 243 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 ZNF783Q6ZMS7 281 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 DPY19L3Q6ZPD9 716 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 KIAA1328Q86T90 577 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 C17orf53Q8N3J3 647 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 RYBPQ8N488 228 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 RTL3Q8N8U3 475 aaKnown RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 ARRDC3Q96B67 414 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 BTBD6Q96KE9 485 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 CCDC114Q96M63 670 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 SLC6A18Q96N87 628 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 PEBP4Q96S96 227 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 KCTD15Q96SI1 283 aaPredicted RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 EPAS1Q99814 870 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 ORAI3Q9BRQ5 295 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 SNRNP25Q9BV90 132 aaKnown RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 TM6SF2Q9BZW4 377 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 TSGA10Q9BZW7 698 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 KLC2Q9H0B6 622 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 THAP2Q9H0W7 228 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 PCED1AQ9H1Q7 454 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 MAGEH1Q9H213 219 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 NOL6Q9H6R4 1146 aaKnown RBP8.44□□□□□ -1.06
HDAC6-221ENST00000477561 GAREM1Q9H706 876 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 IL21RQ9HBE5 538 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 IL36AQ9UHA7 158 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 AP4E1Q9UPM8 1137 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 SCINQ9Y6U3 715 aa8.44□□□□□ -1.06
HDAC6-221ENST00000477561 CACNA1AO00555 2505 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 A0A1W2PPC4 97 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 RASA4BC9J798 803 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 EEF2KO00418 725 aaKnown RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 WNT9AO14904 365 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ALOX15BO15296 676 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 DAPK3O43293 454 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 RASA4O43374 803 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 BUB1O43683 1085 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 KDELR3O43731 214 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 PRPSAP2O60256 369 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 LRCH4O75427 683 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 LEFTY1O75610 366 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 RNF8O76064 485 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 LCA5LO95447 670 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 MYBL1P10243 752 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 CD59P13987 128 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 TCF4P15884 667 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ETFBP38117 255 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 AFF3P51826 1226 aaKnown RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 AIF1P55008 147 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 TPI1P60174 286 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 SLC20A2Q08357 652 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 SEMA3BQ13214 749 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 SLC18A3Q16572 532 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ASTE1Q2TB18 679 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 HLA-BQ31612 363 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 CARD16Q5EG05 197 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 PPP6R3Q5H9R7 873 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 KCNT1Q5JUK3 1230 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 DNTTIP2Q5QJE6 756 aaKnown RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 PRAMEF14Q5SWL7 426 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 AGBL4Q5VU57 503 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ALKBH5Q6P6C2 394 aaKnown RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ZNF662Q6ZS27 426 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ADAT2Q7Z6V5 191 aaKnown RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ACRBPQ8NEB7 543 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 TMIEQ8NEW7 156 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 OR6K2Q8NGY2 324 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 KLK6Q92876 244 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ARHGEF26Q96DR7 871 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 TRIM11Q96F44 468 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 HMCESQ96FZ2 354 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 CELF6Q96J87 481 aaKnown RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 CAMK1GQ96NX5 476 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 DESI2Q9BSY9 194 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ZDHHC6Q9H6R6 413 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 CATSPERBQ9H7T0 1116 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ZWILCHQ9H900 591 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 MRPL47Q9HD33 250 aaKnown RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 RRAGDQ9NQL2 400 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 AASDHPPTQ9NRN7 309 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 HECAQ9UBI9 543 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-221ENST00000477561 HPCAL4Q9UM19 191 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 ANKRD6Q9Y2G4 727 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 SNX11Q9Y5W9 270 aa8.43□□□□□ -1.06
HDAC6-221ENST00000477561 DOCK4Q8N1I0 1966 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 PCDH15Q96QU1 1955 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 USP27XA6NNY8 438 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 RIOK3O14730 519 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 PLRG1O43660 514 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 KRT86O43790 486 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 SH3BP5O60239 455 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 RNGTTO60942 597 aaKnown RBP8.42□□□□□ -1.06
HDAC6-221ENST00000477561 GJB3O75712 270 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 TMCC1O94876 653 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 PRNPP04156 253 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 WNT1P04628 370 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 ADRB1P08588 477 aa8.42□□□□□ -1.06
HDAC6-221ENST00000477561 CSRP1P21291 193 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms