RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 HECAQ9UBI9 543 aaPredicted RBP13.54□□□□□ -0.24
CPSF4-210ENST00000469897 FADS3Q9Y5Q0 445 aa13.54□□□□□ -0.24
CPSF4-210ENST00000469897 DMXL2Q8TDJ6 3036 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 FFAR2O15552 330 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 MYF5P13349 255 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 ADRB3P13945 408 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 ACP1P24666 158 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 SDC4P31431 198 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 RFC1P35251 1148 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-210ENST00000469897 STAT1P42224 750 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 CCNHP51946 323 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-210ENST00000469897 NEK3P51956 506 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 ILKQ13418 452 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 FGL2Q14314 439 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 TMEM259Q4ZIN3 620 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 CDKAL1Q5VV42 579 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 GCNT7Q6ZNI0 430 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 TMC6Q7Z403 805 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 SLC22A18ASQ8N1D0 253 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 OR6K2Q8NGY2 324 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 ARHGEF2Q92974 986 aaKnown RBP13.53□□□□□ -0.24
CPSF4-210ENST00000469897 PCMTD1Q96MG8 357 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-210ENST00000469897 TM6SF2Q9BZW4 377 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 SCUBE2Q9NQ36 999 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 HS3ST3A1Q9Y663 406 aa13.53□□□□□ -0.24
CPSF4-210ENST00000469897 A0A087WV48 116 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 POM121BA6NF01 834 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 C2CD4BA6NLJ0 364 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 RAD51BO15315 384 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 PIAS2O75928 621 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 LRIG2O94898 1065 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 TPM2P07951 284 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 PLEKP08567 350 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-210ENST00000469897 GIMD1P0DJR0 217 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 KRT3P12035 628 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 UNGP13051 313 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-210ENST00000469897 RHOQP17081 205 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 ITGB7P26010 798 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 HDAC4P56524 1084 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 JAM2P57087 298 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 RPS21P63220 83 aaKnown RBP13.52□□□□□ -0.25
CPSF4-210ENST00000469897 DAB2P98082 770 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 INSM1Q01101 510 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-210ENST00000469897 PTP4A2Q12974 167 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 SOWAHCQ53LP3 525 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-210ENST00000469897 HS1BP3Q53T59 392 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 MANEALQ5VSG8 457 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 ABI3BPQ7Z7G0 1075 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 NLRP14Q86W24 1093 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 CCDC185Q8N715 623 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 CENPIQ92674 756 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-210ENST00000469897 CRELD1Q96HD1 420 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 ZDHHC6Q9H6R6 413 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 DNAJC28Q9NX36 388 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 ADAM22Q9P0K1 906 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 CLCA2Q9UQC9 943 aa13.52□□□□□ -0.25
CPSF4-210ENST00000469897 IGLON5A6NGN9 336 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 C16orf96A6NNT2 1141 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 KRIT1O00522 736 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 MT-CO3P00414 261 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 ITPKBP27987 946 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 PTPN9P43378 593 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 COPB1P53618 953 aaKnown RBP13.51□□□□□ -0.25
CPSF4-210ENST00000469897 E2F1Q01094 437 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 NRG1Q02297 640 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-210ENST00000469897 SGCGQ13326 291 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 RTP5Q14D33 572 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 SYCP1Q15431 976 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 MYLK3Q32MK0 819 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 WDR59Q6PJI9 974 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 KDM7AQ6ZMT4 941 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 PARS2Q7L3T8 475 aaKnown RBP13.51□□□□□ -0.25
CPSF4-210ENST00000469897 STRADAQ7RTN6 431 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 PLPP6Q8IY26 295 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 PYROXD2Q8N2H3 581 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 NETO2Q8NC67 525 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 OR4C6Q8NH72 309 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 FAM172AQ8WUF8 416 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 ISG20Q96AZ6 181 aaKnown RBP13.51□□□□□ -0.25
CPSF4-210ENST00000469897 NXPE2Q96DL1 559 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 SELENOOQ9BVL4 669 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 NRSN2Q9GZP1 204 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 MAGEH1Q9H213 219 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 TMEM248Q9NWD8 314 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 IPO11Q9UI26 975 aaKnown RBP13.51□□□□□ -0.25
CPSF4-210ENST00000469897 HPCAL4Q9UM19 191 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
CPSF4-210ENST00000469897 LAMA5O15230 3695 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 FREM2Q5SZK8 3169 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 A6NNZ2 444 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 NEMP1O14524 444 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 TSPAN6O43657 245 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 BUB1O43683 1085 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 TLX3O43711 291 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-210ENST00000469897 KDELR3O43731 214 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 AP1G1O43747 822 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 RAMP2O60895 175 aa13.5□□□□□ -0.25
CPSF4-210ENST00000469897 POP4O95707 220 aaKnown RBP13.5□□□□□ -0.25
CPSF4-210ENST00000469897 ETFBP38117 255 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms