RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 YJEFN3A6XGL0 299 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 E7ENQ6 273 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 GNRH1P01148 92 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 KCNE1P15382 129 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 ACADSP16219 412 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 PBLDP30039 288 aaPredicted RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 STXBP5Q5T5C0 1151 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 CAPRIN2Q6IMN6 1127 aaKnown RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 AFTPHQ6ULP2 937 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 CRELD2Q6UXH1 353 aaPredicted RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 TAC4Q86UU9 113 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 GPSM1Q86YR5 675 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 ZNF555Q8NEP9 628 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 MRPS23Q9Y3D9 190 aaKnown RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 MYH14Q7Z406 1995 aaKnown RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 CBX6O95503 412 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 LPOP22079 712 aaPredicted RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 CCNCP24863 283 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 RAP1GDS1P52306 607 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 TBL3Q12788 808 aaKnown RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 ECHDC2Q86YB7 292 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 SLC41A1Q8IVJ1 513 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 NAF1Q96HR8 494 aaKnown RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 ASB8Q9H765 288 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 GRHL1Q9NZI5 618 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 SRRDQ9UH36 339 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 APPL1Q9UKG1 709 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 ADAMTS5Q9UNA0 930 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 TNPO3Q9Y5L0 923 aaKnown RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 COL16A1Q07092 1604 aaPredicted RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 TMEM114B3SHH9 223 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 CXCL14O95715 111 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 GABRR2P28476 465 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 CDC25CP30307 473 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 PURAQ00577 322 aaKnown RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 PDE1CQ14123 709 aaPredicted RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 LMO3Q8TAP4 145 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 ALG9Q9H6U8 611 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 CLCA2Q9UQC9 943 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 A0A0U1RQF3 1178 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.95□□□□□ -0.18
BRAT1-203ENST00000467558 E9PAM4 449 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 PCDH8O95206 1070 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 DGKAP23743 735 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 PIK3CGP48736 1102 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 CTBP1Q13363 440 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 DPYSL2Q16555 572 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 FUT11Q495W5 492 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 WASHC2DQ5SRD0 308 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 LDLRAD1Q5T700 205 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 RNF43Q68DV7 783 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 RPAINQ86UA6 219 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 PYROXD2Q8N2H3 581 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 EXOC2Q96KP1 924 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 RHOJQ9H4E5 214 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 PARVBQ9HBI1 364 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 SNX15Q9NRS6 342 aa13.95□□□□□ -0.18
BRAT1-203ENST00000467558 TPST1O60507 370 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 AP2A1O95782 977 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 ABL2P42684 1182 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 PLIN5Q00G26 463 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 MAD2L1Q13257 205 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-203ENST00000467558 CERCAMQ5T4B2 595 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 HDAC10Q969S8 669 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 GIMAP4Q9NUV9 329 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 FBXW11Q9UKB1 542 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 ZNF510Q9Y2H8 683 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 VPS4BO75351 444 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 BAIAP3O94812 1187 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 HSPA13P48723 471 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 PTPRNQ16849 979 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 TAS1R3Q7RTX0 852 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 CPNE8Q86YQ8 564 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 RIN3Q8TB24 985 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 INPP5DQ92835 1189 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 CASP10Q92851 521 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 MRPL57Q9BQC6 102 aaKnown RBP13.94□□□□□ -0.18
BRAT1-203ENST00000467558 MMADHCQ9H3L0 296 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-203ENST00000467558 ZDHHC6Q9H6R6 413 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 CHCHD3Q9NX63 227 aaKnown RBP13.94□□□□□ -0.18
BRAT1-203ENST00000467558 IFRD1O00458 451 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-203ENST00000467558 SEC24DO94855 1032 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-203ENST00000467558 GLUD1P00367 558 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 TFEBP19484 476 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 GABRB2P47870 512 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 NECAB2Q7Z6G3 386 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 TRIM48Q8IWZ4 208 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 POU5F2Q8N7G0 328 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 RDH11Q8TC12 318 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 SLCO2A1Q92959 643 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 FIZ1Q96SL8 496 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 FAM126AQ9BYI3 521 aaPredicted RBP13.94□□□□□ -0.18
BRAT1-203ENST00000467558 SLCO1B3Q9NPD5 702 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 GDAP2Q9NXN4 497 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 BLOC1S6Q9UL45 172 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 DTNAQ9Y4J8 743 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 MYH1P12882 1939 aa13.94□□□□□ -0.18
BRAT1-203ENST00000467558 MGAT4DA6NG13 374 aa13.93□□□□□ -0.18
BRAT1-203ENST00000467558 KATNA1O75449 491 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms