RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 CXorf38Q8TB03 319 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 ACDQ96AP0 544 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 MARK4Q96L34 752 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 TCHPQ9BT92 498 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 C1QTNF1Q9BXJ1 281 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 YTHDF1Q9BYJ9 559 aaKnown RBP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 UNKQ9C0B0 810 aaKnown RBP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 DHX35Q9H5Z1 703 aaKnown RBP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 TUT1Q9H6E5 874 aaKnown RBP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 LRRC40Q9H9A6 602 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 SPATA7Q9P0W8 599 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 TMEM181Q9P2C4 612 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 CNTNAP1P78357 1384 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 GOLGA8TH3BQL2 631 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 SDHDO14521 159 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 GRAP2O75791 330 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 GNAO1P09471 354 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 CCR10P46092 362 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 SP4Q02446 784 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 FSTL1Q12841 308 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 MERTKQ12866 999 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 SQLEQ14534 574 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 DLG2Q15700 870 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 GPR107Q5VW38 600 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 FAM45BPQ6NSW5 357 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 FAM117BQ6P1L5 589 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 SIX6OS1Q8N1H7 587 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 PCDH20Q8N6Y1 951 aaKnown RBP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 OR2T34Q8NGX1 318 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 OR2T3Q8NH03 318 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 UBA3Q8TBC4 463 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 FAM45AQ8TCE6 357 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 PNPT1Q8TCS8 783 aaKnown RBP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 STYXQ8WUJ0 223 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 UPF1Q92900 1129 aaKnown RBP eCLIP12.43□□□□□ -0.428e-12■■■■■ 33.7
ITGB5-202ENST00000460797 CSPG4P5Q96PW8 444 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 C1orf50Q9BV19 199 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 EIF2AQ9BY44 585 aaKnown RBP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 UPF3AQ9H1J1 476 aaKnown RBP12.43□□□□□ -0.42
ITGB5-202ENST00000460797 ZNF302Q9NR11 478 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 RIC8BQ9NVN3 520 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 GIN1Q9NXP7 522 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
ITGB5-202ENST00000460797 SPATA31C2B4DYI2 1134 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 CFAP99D6REC4 459 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 TK2O00142 265 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 NPHS1O60500 1241 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 DDHD2O94830 711 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 CPNE6O95741 557 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 HSPA8P11142 646 aaKnown RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 CYP3A5P20815 502 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 RPL10P27635 214 aaKnown RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 TMBIM6P55061 237 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 NFATC3Q12968 1075 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 BNIP3Q12983 259 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 ATP1A4Q13733 1029 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 BAATQ14032 418 aaPredicted RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 NR1D2Q14995 579 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 TMEM26Q6ZUK4 368 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 TMEM135Q86UB9 458 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 GOLM1Q8NBJ4 401 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 HMGCLL1Q8TB92 370 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 ZUFSPQ96AP4 578 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 PPWD1Q96BP3 646 aaKnown RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 MAF1Q9H063 256 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 FAM124BQ9H5Z6 455 aaPredicted RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 CAB39LQ9H9S4 337 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 CCM2LQ9NUG4 571 aaPredicted RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 GGA3Q9NZ52 723 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 SEPT3Q9UH03 358 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 KIAA1257Q9ULG3 409 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 GPC6Q9Y625 555 aaPredicted RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 PSME4Q14997 1843 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 PARP14Q460N5 1801 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 TARM1B6A8C7 271 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 NOL3O60936 208 aaKnown RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 CNOT3O75175 753 aaKnown RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 TIPRLO75663 272 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 PFKMP08237 780 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 GSTT2P0CG29 244 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 GSTT2BP0CG30 244 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 PTPN9P43378 593 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 GLUD2P49448 558 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 NAGLUP54802 743 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 MPP1Q00013 466 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 SLC6A3Q01959 620 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 TARBP2Q15633 366 aaKnown RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 EGFLAMQ63HQ2 1017 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 CES3Q6UWW8 571 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 ABRAXAS1Q6UWZ7 409 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 DHFR2Q86XF0 187 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 EPHX4Q8IUS5 362 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 CBR4Q8N4T8 237 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 NSUN6Q8TEA1 469 aaKnown RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 SEPT8Q92599 483 aa12.42□□□□□ -0.42
ITGB5-202ENST00000460797 ZNF669Q96BR6 464 aaPredicted RBP12.42□□□□□ -0.42
ITGB5-202ENST00000460797 HEXIM2Q96MH2 286 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms