RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 AURKAIP1Q9NWT8 199 aaPredicted RBP4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 PLK2Q9NYY3 685 aa4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 MRPL15Q9P015 296 aaKnown RBP4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 SH3BP4Q9P0V3 963 aa4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 CTNNAL1Q9UBT7 734 aa4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 TESQ9UGI8 421 aaKnown RBP4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 PTRH2Q9Y3E5 179 aaKnown RBP4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 SIRT4Q9Y6E7 314 aaPredicted RBP4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 SOS1Q07889 1333 aaPredicted RBP4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 SPATA31A5Q5VU36 1347 aa4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 SPATA31A6Q5VVP1 1343 aa4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 SPATA31A7Q8IWB4 1347 aa4.42□□□□□ -1.7
HMGN3P1-201ENST00000453847 A0A1W2PRG0 241 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 LINC00473A8K010 186 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 NPIPB11E5RHQ5 1161 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 CTDSP2O14595 271 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 PSMD10O75832 226 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 C22orf31O95567 290 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 DDAH2O95865 285 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 RB1P06400 928 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 NRIP1P48552 1158 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 BLKP51451 505 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 OAZ1P54368 228 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 CLDN2P57739 230 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 PPARDQ03181 441 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 RUNX2Q13950 521 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 FGFBP1Q14512 234 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 ME3Q16798 604 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 ERCC6LQ2NKX8 1250 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 COL28A1Q2UY09 1125 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 PLK5Q496M5 336 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 TIGD2Q4W5G0 525 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 HS1BP3Q53T59 392 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 CXorf66Q5JRM2 361 aaPredicted RBP4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 PLAC9Q5JTB6 97 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 ERMARDQ5T6L9 678 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 VWA5B1Q5TIE3 1220 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 ABHD17BQ5VST6 288 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 PMS2CLQ68D20 193 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 DENND2CQ68D51 928 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 FBXO42Q6P3S6 717 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 TSSK4Q6SA08 328 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 IL20RBQ6UXL0 311 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 NAPRTQ6XQN6 538 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 Q6ZNX1 250 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 MFSD6Q6ZSS7 791 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 TRIM74Q86UV6 250 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 TRIM73Q86UV7 250 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 KBTBD6Q86V97 674 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 GHDCQ8N2G8 530 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 AVL9Q8NBF6 648 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 DNAAF1Q8NEP3 725 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 OR52N4Q8NGI2 321 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 GOT1L1Q8NHS2 421 aaPredicted RBP4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 POMGNT1Q8WZA1 660 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 SMARCE1Q969G3 411 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 ATP6V1E2Q96A05 226 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 LENG9Q96B70 501 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 TEPSINQ96N21 525 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 OR2A14Q96R47 310 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 APOL6Q9BWW8 343 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 TKTL2Q9H0I9 626 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 PDZD7Q9H5P4 517 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 SH2D4AQ9H788 454 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 GIMAP4Q9NUV9 329 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 HAO1Q9UJM8 370 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 ST3GAL5Q9UNP4 418 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 CCL27Q9Y4X3 112 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 MAST3O60307 1309 aa4.41□□□□□ -1.7
HMGN3P1-201ENST00000453847 ARHGAP10A1A4S6 786 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 URADA6NGE7 173 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 GLOD5A6NK44 160 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 LRRC53A6NM62 1247 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLC7A4O43246 635 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 STRNO43815 780 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 CBX6O95503 412 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 IFNAR1P17181 557 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 MPLP40238 635 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 ZNF41P51814 821 aaPredicted RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 ARSFP54793 590 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 F2RL1P55085 397 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 RRP1P56182 461 aaKnown RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 PKP1Q13835 747 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 LARS2Q15031 903 aaKnown RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 PRKD1Q15139 912 aaPredicted RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 NTRK2Q16620 822 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 AARS2Q5JTZ9 985 aaKnown RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 HIST2H2BCQ6DN03 193 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 HIST2H2BDQ6DRA6 164 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 TMEM154Q6P9G4 183 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 RANBP10Q6VN20 620 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 GLDNQ6ZMI3 551 aaPredicted RBP4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 CFAP77Q6ZQR2 320 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 DCDC5Q6ZRR9 648 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 LCNL1Q6ZST4 164 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 SLFN11Q7Z7L1 901 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 GLRX5Q86SX6 157 aa4.4□□□□□ -1.71
HMGN3P1-201ENST00000453847 PAQR4Q8N4S7 273 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms