RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CD38P28907 300 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 EPHB2P29323 1055 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 HNF1BP35680 557 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 CPA2P48052 419 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 NANOS3P60323 173 aaKnown RBP5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 RPS3AP61247 264 aaKnown RBP5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 IFI35P80217 286 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 CHAF1BQ13112 559 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 DCTN2Q13561 401 aaKnown RBP5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 PLCB4Q15147 1175 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 TAF11Q15544 211 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 PLK5Q496M5 336 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 SLC9C1Q4G0N8 1177 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 VWA5B1Q5TIE3 1220 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 KIAA1614Q5VZ46 1190 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 FAM57BQ71RH2 274 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 KRT74Q7RTS7 529 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 YTHDF3Q7Z739 585 aaKnown RBP5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 ADGRF4Q8IZF3 695 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 TTC39CQ8N584 583 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 SRBD1Q8N5C6 995 aaKnown RBP5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 NCSTNQ92542 709 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 USP6NLQ92738 828 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 KAT2AQ92830 837 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 FAM120BQ96EK7 910 aaKnown RBP5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 SIGLEC11Q96RL6 698 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 PIMREGQ9BSJ6 248 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 SCNM1Q9BWG6 230 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 Q9N2J8 555 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 PTGFRNQ9P2B2 879 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 SLC8A2Q9UPR5 921 aa5.39□□□□□ -1.55
HMGB1P26-201ENST00000452520 CXorf65A6NEN9 183 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 NPIPB15A6NHN6 443 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CGB1A6NKQ9 187 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 C17orf100A8MU93 164 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 TSPAN4O14817 238 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 MSI1O43347 362 aaKnown RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 UGDHO60701 494 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 GUCY1B2O75343 617 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 TULP3O75386 442 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 BCAR3O75815 825 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 PGM3O95394 542 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CSH1P0DML2 217 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CSH2P0DML3 217 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CTSAP10619 480 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 UBL4AP11441 157 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 IL11P20809 199 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 PRKCHP24723 683 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 TM4SF1P30408 202 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 HADHAP40939 763 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 UBA7P41226 1012 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 ARHGAP25P42331 645 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 MTNR1AP48039 350 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 RPS13P62277 151 aaKnown RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 SRSF4Q08170 494 aaKnown RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 PTP4A2Q12974 167 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CDC16Q13042 620 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CAMK1Q14012 370 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 RASA2Q15283 850 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 AP5B1Q2VPB7 878 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 SUPT20HL1Q3ZLR7 823 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 AADACL2Q6P093 401 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 INO80CQ6PI98 192 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 KLHL24Q6TFL4 600 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 NEK8Q86SG6 692 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CNTROBQ8N137 903 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 TMEM217Q8N7C4 229 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 ETNPPLQ8TBG4 499 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 WIPF2Q8TF74 440 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 ELP4Q96EB1 424 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CALML4Q96GE6 196 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 YME1L1Q96TA2 773 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CD180Q99467 661 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CLSTN3Q9BQT9 956 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 NPLQ9BXD5 320 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 CADM1Q9BY67 442 aaKnown RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 PRSS22Q9GZN4 317 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 INTS2Q9H0H0 1204 aaKnown RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 MUC13Q9H3R2 512 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 MROH8Q9H579 483 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 VEZTQ9HBM0 779 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 HDAC6Q9UBN7 1215 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 ZNF215Q9UL58 517 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 ZNF711Q9Y462 761 aa5.38□□□□□ -1.55
HMGB1P26-201ENST00000452520 VILLO15195 856 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 PRPF4O43172 522 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 PPFIA2O75334 1257 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 WNT1P04628 370 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 APOA4P06727 396 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 FCGR2AP12318 317 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 CHRNA5P30532 468 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 ACSL1P33121 698 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 GJC1P36383 396 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 RARSP54136 660 aaKnown RBP5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 CALD1Q05682 793 aaKnown RBP5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 GALNT3Q14435 633 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 IL13RA2Q14627 380 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 DUSP28Q4G0W2 176 aa5.37□□□□□ -1.55
HMGB1P26-201ENST00000452520 PAPD7Q5XG87 772 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms