RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CD180Q99467 661 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 TM2D2Q9BX73 214 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 AGXT2Q9BYV1 514 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 CTDSP1Q9GZU7 261 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 IKZF4Q9H2S9 585 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 ACAD9Q9H845 621 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 PREBQ9HCU5 417 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 TXNRD2Q9NNW7 524 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 ALKBH4Q9NXW9 302 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 CYP46A1Q9Y6A2 500 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 URB2Q14146 1524 aaKnown RBP4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 NUP155O75694 1391 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 NSD2O96028 1365 aa4.76□□□□□ -1.65
HMGB1P16-201ENST00000447155 SAMD9LQ8IVG5 1584 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 TRAPPC8Q9Y2L5 1435 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 LRRC3CA6NJW4 275 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM90A7PA6NKC0 464 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM90A22PA8MWA6 464 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM90A12PA8MX19 464 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM90A23PA8MXZ1 464 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 HMGB1P1B2RPK0 211 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 B4E171 279 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 INPPL1O15357 1258 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 ATP8B1O43520 1251 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 PLAUP00749 431 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 CD4P01730 458 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 TSPAN7P41732 249 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 STAT1P42224 750 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 RARSP54136 660 aaKnown RBP4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 TFF2Q03403 129 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 MTA1Q13330 715 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 BYSLQ13895 437 aaKnown RBP4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 SIM2Q14190 667 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 SEMA3AQ14563 771 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 NFIL3Q16649 462 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAAH2Q6GMR7 532 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 ACAD10Q6JQN1 1059 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLC30A9Q6PML9 568 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 ITPRIPQ8IWB1 547 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 C8orf58Q8NAV2 365 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 SEMA6DQ8NFY4 1073 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM110DQ8TAY7 271 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 C2CD4CQ8TF44 421 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 HASPINQ8TF76 798 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZUFSPQ96AP4 578 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 RNF125Q96EQ8 232 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 CFAP53Q96M91 514 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 FUZQ9BT04 418 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 EFHD1Q9BUP0 239 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 NPLQ9BXD5 320 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 MROH8Q9H579 483 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 IL21RQ9HBE5 538 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 RAI14Q9P0K7 980 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 TNFSF13BQ9Y275 285 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 TET3O43151 1660 aa4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 NUP153P49790 1475 aaKnown RBP4.75□□□□□ -1.65
HMGB1P16-201ENST00000447155 SPAG9O60271 1321 aaKnown RBP4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 PTPRCP08575 1304 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 RGS12O14924 1447 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 FAM135BQ49AJ0 1406 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 GOLGA6L10A0A0M3HER8 536 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 LINC01548A6NM66 108 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 KCNJ18B7U540 433 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLU7O95391 586 aaKnown RBP4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 HLA-DQA2P01906 255 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 SLPIP03973 132 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 CCDC192P0DO97 292 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 ST6GAL1P15907 406 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 HNF1BP35680 557 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 RPP30P78346 268 aaKnown RBP4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 HSF1Q00613 529 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 NUCB1Q02818 461 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 CAMK1Q14012 370 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 TPD52L1Q16890 204 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 TMEM119Q4V9L6 283 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 C10orf76Q5T2E6 689 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 AADACL2Q6P093 401 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 FBXO42Q6P3S6 717 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 GJB7Q6PEY0 223 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 TMCO3Q6UWJ1 677 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 PTF1AQ7RTS3 328 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 RNF144BQ7Z419 303 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 ADGRG6Q86SQ4 1221 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 CHD1LQ86WJ1 897 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 KLBQ86Z14 1044 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZNF366Q8N895 744 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 CCDC191Q8NCU4 936 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 ANKRD20A12PQ8NF67 263 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 RFWD2Q8NHY2 731 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 OSR1Q8TAX0 266 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZCCHC10Q8TBK6 192 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 GPT2Q8TD30 523 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 TBC1D22AQ8WUA7 517 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 RFFLQ8WZ73 363 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 HDAC2Q92769 488 aaKnown RBP4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 NELL1Q92832 810 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 MAP4K1Q92918 833 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 ZBTB10Q96DT7 871 aa4.74□□□□□ -1.65
HMGB1P16-201ENST00000447155 KIF1BPQ96EK5 621 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms