RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SEL1L3Q68CR1 1132 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 RBM43Q6ZSC3 357 aaKnown RBP21.44■■□□□ 1.02
VSX1-206ENST00000444511 OR13H1Q8NG92 308 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 PCDHB18PQ96TA0 734 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 SELENOOQ9BVL4 669 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 TM6SF2Q9BZW4 377 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 ZDHHC6Q9H6R6 413 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 ANO10Q9NW15 660 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 DNAI1Q9UI46 699 aa21.44■■□□□ 1.02
VSX1-206ENST00000444511 CXorf51AA0A1B0GTR3 108 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 FAM72CH0Y354 149 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 UNGP13051 313 aaPredicted RBP21.43■■□□□ 1.02
VSX1-206ENST00000444511 ADRB3P13945 408 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 L1CAMP32004 1257 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 CLDN6P56747 220 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 GEMIN4P57678 1058 aaKnown RBP21.43■■□□□ 1.02
VSX1-206ENST00000444511 MYL5Q02045 173 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 PTP4A2Q12974 167 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 MAPK8IP2Q13387 824 aaPredicted RBP21.43■■□□□ 1.02
VSX1-206ENST00000444511 HS1BP3Q53T59 392 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 FAM72AQ5TYM5 149 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 FAM72DQ6L9T8 149 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 FAM72BQ86X60 149 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 RYBPQ8N488 228 aaPredicted RBP21.43■■□□□ 1.02
VSX1-206ENST00000444511 FAM172AQ8WUF8 416 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 CENPIQ92674 756 aaPredicted RBP21.43■■□□□ 1.02
VSX1-206ENST00000444511 ARHGEF2Q92974 986 aaKnown RBP21.43■■□□□ 1.02
VSX1-206ENST00000444511 ISG20Q96AZ6 181 aaKnown RBP21.43■■□□□ 1.02
VSX1-206ENST00000444511 TBC1D31Q96DN5 1066 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 GBP4Q96PP9 640 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 NDFIP2Q9NV92 336 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 SEPT11Q9NVA2 429 aaKnown RBP21.43■■□□□ 1.02
VSX1-206ENST00000444511 KLHL11Q9NVR0 708 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 TMEM248Q9NWD8 314 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 HPCAL4Q9UM19 191 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 ACTL7AQ9Y615 435 aa21.43■■□□□ 1.02
VSX1-206ENST00000444511 LGALS16A8MUM7 142 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 RAMP2O60895 175 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 LRIG2O94898 1065 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 CALB1P05937 261 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 PLEKP08567 350 aaPredicted RBP21.42■■□□□ 1.02
VSX1-206ENST00000444511 GPD1P21695 349 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 RFC1P35251 1148 aaPredicted RBP21.42■■□□□ 1.02
VSX1-206ENST00000444511 HDAC4P56524 1084 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 CLDN2P57739 230 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 RPS21P63220 83 aaKnown RBP21.42■■□□□ 1.02
VSX1-206ENST00000444511 UBXN1Q04323 297 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 ILKQ13418 452 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 POLD3Q15054 466 aaPredicted RBP21.42■■□□□ 1.02
VSX1-206ENST00000444511 CLEC16AQ2KHT3 1053 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 TMEM259Q4ZIN3 620 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 HES3Q5TGS1 186 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 KIAA1161Q6NSJ0 714 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 GCNT7Q6ZNI0 430 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 NLRP14Q86W24 1093 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 CCDC185Q8N715 623 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 FEM1CQ96JP0 617 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 MAGEH1Q9H213 219 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 LIMA1Q9UHB6 759 aaKnown RBP21.42■■□□□ 1.02
VSX1-206ENST00000444511 FADS3Q9Y5Q0 445 aa21.42■■□□□ 1.02
VSX1-206ENST00000444511 ANKRD11Q6UB99 2663 aaPredicted RBP21.42■■□□□ 1.02
VSX1-206ENST00000444511 A6NNZ2 444 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 SIGLEC6O43699 453 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 CD160O95971 181 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 CDK11BP21127 795 aaKnown RBP21.41■■□□□ 1.02
VSX1-206ENST00000444511 DGKAP23743 735 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 GSCP56915 257 aaPredicted RBP21.41■■□□□ 1.02
VSX1-206ENST00000444511 ZNF211Q13398 564 aaPredicted RBP21.41■■□□□ 1.02
VSX1-206ENST00000444511 STX1AQ16623 288 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 COL28A1Q2UY09 1125 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 PARS2Q7L3T8 475 aaKnown RBP21.41■■□□□ 1.02
VSX1-206ENST00000444511 ABI3BPQ7Z7G0 1075 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 PHF13Q86YI8 300 aaPredicted RBP21.41■■□□□ 1.02
VSX1-206ENST00000444511 PLPP6Q8IY26 295 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 SLC25A45Q8N413 288 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 C3orf20Q8ND61 904 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 OR6K2Q8NGY2 324 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 FAM174AQ8TBP5 190 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 HNRNPLLQ8WVV9 542 aaKnown RBP21.41■■□□□ 1.02
VSX1-206ENST00000444511 NTAN1Q96AB6 310 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 NXPE2Q96DL1 559 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 SLC17A9Q9BYT1 436 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 MAGEB5Q9BZ81 275 aa21.41■■□□□ 1.02
VSX1-206ENST00000444511 ANKRD62A6NC57 917 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 TRIM38O00635 465 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 AP1G1O43747 822 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 DAB2P98082 770 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 TARDBPQ13148 414 aaKnown RBP eCLIP21.4■■□□□ 1.02
VSX1-206ENST00000444511 PROX2Q3B8N5 592 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 WDR59Q6PJI9 974 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 LEKR1Q6ZMV7 388 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 Q6ZSR6 202 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 PTAR1Q7Z6K3 402 aaPredicted RBP21.4■■□□□ 1.02
VSX1-206ENST00000444511 SLFN11Q7Z7L1 901 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 ZNF354CQ86Y25 554 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 OR2AP1Q8NGE2 309 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 LRIG1Q96JA1 1093 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 UCKL1Q9NWZ5 548 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 NEU3Q9UQ49 428 aa21.4■■□□□ 1.02
VSX1-206ENST00000444511 HS3ST3A1Q9Y663 406 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms