RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 IFIT1BQ5T764 474 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 LIN9Q5TKA1 542 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 DENND2CQ68D51 928 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 DENND5AQ6IQ26 1287 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 JMJD6Q6NYC1 403 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 WDR93Q6P2C0 686 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 LMBR1LQ6UX01 489 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 KIF6Q6ZMV9 814 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 STXBP4Q6ZWJ1 553 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 C16orf59Q7L2K0 433 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 FJX1Q86VR8 437 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 TMEM200AQ86VY9 491 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 LONP2Q86WA8 852 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 MICU3Q86XE3 530 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 RFX6Q8HWS3 928 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 PYROXD2Q8N2H3 581 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 MPP5Q8N3R9 675 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 KLHL36Q8N4N3 616 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM169BQ8N8A8 192 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ANKFN1Q8N957 763 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SCFD1Q8WVM8 642 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 IP6K1Q92551 441 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 RFKQ969G6 155 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 TRIM43Q96BQ3 446 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 IFT74Q96LB3 600 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 AIFM3Q96NN9 605 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 CLIC6Q96NY7 704 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM111AQ96PZ2 611 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 WRNIP1Q96S55 665 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 NDNQ99608 321 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 WACQ9BTA9 647 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 TARS2Q9BW92 718 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 BTBD2Q9BX70 525 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 MOV10L1Q9BXT6 1211 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 CALN1Q9BXU9 219 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 MRPL37Q9BZE1 423 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 DCLK3Q9C098 648 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 REXO4Q9GZR2 422 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 C6orf62Q9GZU0 229 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZCWPW1Q9H0M4 648 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ISCUQ9H1K1 167 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 RHBGQ9H310 441 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SNX25Q9H3E2 840 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 EBF2Q9HAK2 575 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 MRPL40Q9NQ50 206 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ITM2CQ9NQX7 267 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 FAM114A2Q9NRY5 505 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 AGPAT3Q9NRZ7 376 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 RBPJLQ9UBG7 517 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 GGA2Q9UJY4 613 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 VPS28Q9UK41 221 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC13A4Q9UKG4 626 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SLC39A10Q9ULF5 831 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 SNX6Q9UNH7 406 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 TNFSF13BQ9Y275 285 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 RPH3AQ9Y2J0 694 aaPredicted RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ZDHHC9Q9Y397 364 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 FRMPD4Q14CM0 1322 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 EIF3AQ14152 1382 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 JCADQ9P266 1359 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 MED14O60244 1454 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 ARHGEF5Q12774 1597 aa4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 RNF17Q9BXT8 1623 aaKnown RBP4.85□□□□□ -1.63
HMGB3P9-201ENST00000441799 LRPPRCP42704 1394 aaKnown RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 USP19O94966 1318 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 ACEP12821 1306 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 PASKQ96RG2 1323 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 A0A1W2PPL8 197 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 TTC26A0AVF1 554 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 TYW5A2RUC4 315 aaKnown RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 MATN2O00339 956 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 BTN3A1O00481 513 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 HGSO14964 777 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 SMAD7O15105 426 aaKnown RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 CLDN3O15551 220 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 TBX1O43435 398 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 CA12O43570 354 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 SYNCRIPO60506 623 aaKnown RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 SURF6O75683 361 aaKnown RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 CDC123O75794 336 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 RASSF9O75901 435 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 DNAJB5O75953 348 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 CIAO1O76071 339 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 RECQL4O94761 1208 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 PGM3O95394 542 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 GAS8O95995 478 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 IL6P05231 212 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 GSTA2P09210 222 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 DLDP09622 509 aaKnown RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 CLUP10909 449 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 RALAP11233 206 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 GJA1P17302 382 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 CCNA2P20248 432 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 SYT1P21579 422 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 STARP49675 285 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 TUBP50607 506 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 HNRNPMP52272 730 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 GBX2P52951 348 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 P2RX3P56373 397 aa4.84□□□□□ -1.63
HMGB3P9-201ENST00000441799 EIF3EP60228 445 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms