RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 PRDM5Q9NQX1 630 aaPredicted RBP10.58□□□□□ -0.72
CPNE1-218ENST00000439806 NDFIP2Q9NV92 336 aa10.58□□□□□ -0.72
CPNE1-218ENST00000439806 PNPOQ9NVS9 261 aa10.58□□□□□ -0.72
CPNE1-218ENST00000439806 TMEM248Q9NWD8 314 aa10.58□□□□□ -0.72
CPNE1-218ENST00000439806 MARCH2Q9P0N8 246 aa10.58□□□□□ -0.72
CPNE1-218ENST00000439806 L3MBTL1Q9Y468 752 aa10.58□□□□□ -0.72
CPNE1-218ENST00000439806 PCDHB12Q9Y5F1 795 aa10.58□□□□□ -0.72
CPNE1-218ENST00000439806 CDY1Q9Y6F8 540 aa10.58□□□□□ -0.72
CPNE1-218ENST00000439806 FAM95CA0A1B0GW59 222 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 HEATR9A2RTY3 570 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 MTMR11A4FU01 709 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CAPN14A8MX76 684 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 PHGDHO43175 533 aaKnown RBP10.57□□□□□ -0.72
CPNE1-218ENST00000439806 HOXA2O43364 376 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CIB2O75838 187 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 VAPBO95292 243 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 ANP32DO95626 131 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 INHAP05111 366 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 HMBSP08397 361 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 COL6A2P12110 1019 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 DNAJB1P25685 340 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 PGM1P36871 562 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 AVPR1AP37288 418 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CD151P48509 253 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 SLC12A2P55011 1212 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 WNT3AP56704 352 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 MPP1Q00013 466 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 HNRNPDQ14103 355 aaKnown RBP10.57□□□□□ -0.72
CPNE1-218ENST00000439806 DLG2Q15700 870 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 DNAL1Q4LDG9 190 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 ACBD5Q5T8D3 534 aaPredicted RBP10.57□□□□□ -0.72
CPNE1-218ENST00000439806 C6orf163Q5TEZ5 329 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 MARC1Q5VT66 337 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 DENND5AQ6IQ26 1287 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 ESRP1Q6NXG1 681 aaKnown RBP10.57□□□□□ -0.72
CPNE1-218ENST00000439806 FUT10Q6P4F1 479 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 KDELC1Q6UW63 502 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 ZYG11AQ6WRX3 759 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 TREML1Q86YW5 311 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 TMPRSS6Q8IU80 811 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CNTN4Q8IWV2 1026 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 TTC9BQ8N6N2 239 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 SLC43A3Q8NBI5 491 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 TTC8Q8TAM2 541 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CALML6Q8TD86 181 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 PXYLP1Q8TE99 480 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 SEPT8Q92599 483 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 FATE1Q969F0 183 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 HMCESQ96FZ2 354 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 ELMO2Q96JJ3 720 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 BTN2A3PQ96KV6 586 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CAPNS2Q96L46 248 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 MRGPRX2Q96LB1 330 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 NUDCD1Q96RS6 583 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 SORT1Q99523 831 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 TACO1Q9BSH4 297 aaKnown RBP10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CCDC106Q9BWC9 280 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CDH19Q9H159 772 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 MMADHCQ9H3L0 296 aaPredicted RBP10.57□□□□□ -0.72
CPNE1-218ENST00000439806 EBF2Q9HAK2 575 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 CLIC5Q9NZA1 410 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 IL37Q9NZH6 218 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 RUVBL2Q9Y230 463 aaKnown RBP10.57□□□□□ -0.72
CPNE1-218ENST00000439806 C15orf41Q9Y2V0 281 aa10.57□□□□□ -0.72
CPNE1-218ENST00000439806 TANC1Q9C0D5 1861 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 A0A087X1B8 175 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 PRR5-ARHGAP8B1AHC4 643 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 G3V2L1 256 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 ENPP3O14638 875 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 DIAPH2O60879 1101 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 SIN3BO75182 1162 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 SOAT2O75908 522 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 ALDH2P05091 517 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 HAPLN1P10915 354 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MYL4P12829 197 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 ALOX15P16050 662 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 STMN1P16949 149 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 FGFR3P22607 806 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 CHRNA4P43681 627 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 SLC11A1P49279 550 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 IDH3AP50213 366 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 GATMP50440 423 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 SERPINH1P50454 418 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 RAB10P61026 200 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 ARHGAP8P85298 464 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 KDSRQ06136 332 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 SMARCB1Q12824 385 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 TAF10Q12962 218 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MTA1Q13330 715 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 CTBP1Q13363 440 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 UBAP2LQ14157 1087 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MRPL58Q14197 206 aaKnown RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 CCDC6Q16204 474 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 TSNAXIP1Q2TAA8 658 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 HSF5Q4G112 596 aaPredicted RBP10.56□□□□□ -0.72
CPNE1-218ENST00000439806 ARTNQ5T4W7 220 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 LRRC8EQ6NSJ5 796 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 RFWD3Q6PCD5 774 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 KDELC2Q7Z4H8 507 aa10.56□□□□□ -0.72
CPNE1-218ENST00000439806 MIB1Q86YT6 1006 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms