RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ARFGAP1Q8N6T3 406 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 MAB21L3Q8N8X9 362 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 TDRD5Q8NAT2 981 aaKnown RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 TMEM237Q96Q45 408 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 NUF2Q9BZD4 464 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 FAM50BQ9Y247 325 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 ADH1AP07327 375 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 ACRP10323 421 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 LAG3P18627 525 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 CTNNB1P35222 781 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 CXCR3P49682 368 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 CDK7P50613 346 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 PKN3Q6P5Z2 889 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 N4BP2L2Q92802 583 aaPredicted RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 HMCESQ96FZ2 354 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 DRC3Q9H069 523 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 UPF3AQ9H1J1 476 aaKnown RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 ADAM7Q9H2U9 754 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 SLC25A13Q9UJS0 675 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 CFAP99D6REC4 459 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 NVLO15381 856 aaKnown RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 PRPF4O43172 522 aaKnown RBP eCLIP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 EDF1O60869 148 aaKnown RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 ASMTLO95671 621 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 PFKMP08237 780 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 COPAP53621 1224 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 GPX6P59796 221 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 DSC2Q02487 901 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 GALNT3Q14435 633 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 TRIP4Q15650 581 aaPredicted RBP14.22□□□□□ -0.13
SCAF4-202ENST00000399804 RGS9BPQ6ZS82 235 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 NECAB2Q7Z6G3 386 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 SPATA24Q86W54 205 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 SPATA6LQ8N4H0 392 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 LINC01465Q8N7H1 131 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 OR7D4Q8NG98 312 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 PSMG2Q969U7 264 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 IGSF9Q9P2J2 1179 aa14.22□□□□□ -0.13
SCAF4-202ENST00000399804 C2P06681 752 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 HSPA8P11142 646 aaKnown RBP14.21□□□□□ -0.13
SCAF4-202ENST00000399804 SERPINB5P36952 375 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 YBEYP58557 167 aaPredicted RBP14.21□□□□□ -0.13
SCAF4-202ENST00000399804 BCL2L1Q07817 233 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 KCNJ11Q14654 390 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 RHBDF2Q6PJF5 856 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 KATNBL1Q9H079 304 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 ASAH2Q9NR71 780 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 VPS45Q9NRW7 570 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 SLC38A8A6NNN8 435 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 FAM72CH0Y354 149 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 ACSL4O60488 711 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 UGT1A9O60656 530 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 TCEA3O75764 348 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 ITGB1P05556 798 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 CCL5P13501 91 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 ITGB6P18564 788 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 MAPRE2Q15555 327 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 ARMC12Q5T9G4 340 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 FAM72AQ5TYM5 149 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 SMYD5Q6GMV2 418 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 FAM72DQ6L9T8 149 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 FAM72BQ86X60 149 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 UNC5BQ8IZJ1 945 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 KCTD4Q8WVF5 259 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 PBXIP1Q96AQ6 731 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 OXNAD1Q96HP4 312 aaPredicted RBP14.21□□□□□ -0.13
SCAF4-202ENST00000399804 UGT1A7Q9HAW7 530 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 UGT1A10Q9HAW8 530 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 UGT1A8Q9HAW9 530 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 USP29Q9HBJ7 922 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 CHKBQ9Y259 395 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 L3MBTL1Q9Y468 752 aa14.21□□□□□ -0.13
SCAF4-202ENST00000399804 CLDN11O75508 207 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 HTR7P34969 479 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 ABL2P42684 1182 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 MLLT6P55198 1093 aaPredicted RBP14.21□□□□□ -0.14
SCAF4-202ENST00000399804 POU4F1Q01851 419 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 PPIDQ08752 370 aaKnown RBP14.21□□□□□ -0.14
SCAF4-202ENST00000399804 PPM1JQ5JR12 505 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 C3orf58Q8NDZ4 430 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 OMDQ99983 421 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 OSBPL2Q9H1P3 480 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 TAS2R13Q9NYV9 303 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 PLLPQ9Y342 182 aa14.21□□□□□ -0.14
SCAF4-202ENST00000399804 TRPC5OSA6NMA1 111 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 MGEA5O60502 916 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 H2AFYO75367 372 aaKnown RBP14.2□□□□□ -0.14
SCAF4-202ENST00000399804 C1RP00736 705 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 COL6A1P12109 1028 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 FMO4P31512 558 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 ATXN3P54252 364 aaPredicted RBP14.2□□□□□ -0.14
SCAF4-202ENST00000399804 HNRNPDQ14103 355 aaKnown RBP14.2□□□□□ -0.14
SCAF4-202ENST00000399804 UGT3A1Q6NUS8 523 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 LAYNQ6UX15 382 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 PIWIL2Q8TC59 973 aaKnown RBP14.2□□□□□ -0.14
SCAF4-202ENST00000399804 PXYLP1Q8TE99 480 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 SERAC1Q96JX3 654 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 MRPL1Q9BYD6 325 aaKnown RBP14.2□□□□□ -0.14
SCAF4-202ENST00000399804 SEZ6LQ9BYH1 1024 aa14.2□□□□□ -0.14
SCAF4-202ENST00000399804 GPR62Q9BZJ7 368 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms