RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 PACS1Q6VY07 963 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 SCUBE3Q8IX30 993 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 ABHD16BQ9H3Z7 469 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 RTN3O95197 1032 aaPredicted RBP17.41■□□□□ 0.38
SIN3A-203ENST00000394949 URODP06132 367 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 ADIGQ0VDE8 80 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 CDC16Q13042 620 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 KHDC1Q4VXA5 237 aaKnown RBP17.41■□□□□ 0.38
SIN3A-203ENST00000394949 IKBIPQ70UQ0 350 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 AMIGO2Q86SJ2 522 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 C10orf107Q8IVU9 208 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 TBC1D21Q8IYX1 336 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 CELF6Q96J87 481 aaKnown RBP17.41■□□□□ 0.38
SIN3A-203ENST00000394949 HOPXQ9BPY8 73 aaPredicted RBP17.41■□□□□ 0.38
SIN3A-203ENST00000394949 HGH1Q9BTY7 390 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 EBF2Q9HAK2 575 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 ABCB10Q9NRK6 738 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 SALL4Q9UJQ4 1053 aa17.41■□□□□ 0.38
SIN3A-203ENST00000394949 BCL9O00512 1426 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 TISP43B9A030 160 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 CCNT2O60583 730 aaKnown RBP17.4■□□□□ 0.38
SIN3A-203ENST00000394949 NPNTQ6UXI9 565 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 FLCNQ8NFG4 579 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 OR52K1Q8NGK4 314 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 NKD2Q969F2 451 aaPredicted RBP17.4■□□□□ 0.38
SIN3A-203ENST00000394949 TRMOQ9BU70 441 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 PACSIN3Q9UKS6 424 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 FGRP09769 529 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 HALP42357 657 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 DACT2Q5SW24 774 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 REPS2Q8NFH8 660 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 CADM1Q9BY67 442 aaKnown RBP17.4■□□□□ 0.38
SIN3A-203ENST00000394949 MAN1C1Q9NR34 630 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 GNEQ9Y223 722 aaKnown RBP17.4■□□□□ 0.38
SIN3A-203ENST00000394949 WNT10BO00744 389 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 MBL2P11226 248 aaPredicted RBP17.4■□□□□ 0.38
SIN3A-203ENST00000394949 PABPC1P11940 636 aaKnown RBP17.4■□□□□ 0.38
SIN3A-203ENST00000394949 ZACNQ401N2 412 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 MECRQ9BV79 373 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 SNX15Q9NRS6 342 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 ZNF180Q9UJW8 692 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
SIN3A-203ENST00000394949 ERBB2P04626 1255 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 YBX3P16989 372 aaKnown RBP eCLIP17.4■□□□□ 0.385e-6■■□□□ 11.5
SIN3A-203ENST00000394949 EPHA3P29320 983 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 IL12AP29459 219 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 RAB10P61026 200 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 PROSER1Q86XN7 944 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 PSMA8Q8TAA3 256 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 MKL1Q969V6 931 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 OSBPL6Q9BZF3 934 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 GSTK1Q9Y2Q3 226 aa17.4■□□□□ 0.38
SIN3A-203ENST00000394949 H0YC42 278 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 PPP2R1BP30154 601 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 ADSLP30566 484 aaPredicted RBP17.39■□□□□ 0.38
SIN3A-203ENST00000394949 GPC1P35052 558 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 APOBEC3HQ6NTF7 200 aaKnown RBP17.39■□□□□ 0.38
SIN3A-203ENST00000394949 ZNF467Q7Z7K2 595 aaPredicted RBP17.39■□□□□ 0.38
SIN3A-203ENST00000394949 WDR36Q8NI36 951 aaKnown RBP17.39■□□□□ 0.38
SIN3A-203ENST00000394949 ELMO3Q96BJ8 720 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 CPB2Q96IY4 423 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 EMILIN2Q9BXX0 1053 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 LNPEPQ9UIQ6 1025 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 RPS6KA6Q9UK32 745 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 NUDT5Q9UKK9 219 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 GMPPBQ9Y5P6 360 aa17.39■□□□□ 0.38
SIN3A-203ENST00000394949 SLC12A8A0AV02 714 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 ZNF7P17097 686 aaPredicted RBP17.39■□□□□ 0.37
SIN3A-203ENST00000394949 CYP2C18P33260 490 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 FBXO30Q8TB52 745 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 SYT15Q9BQS2 421 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 DKK3Q9UBP4 350 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 FETUBQ9UGM5 382 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 ARHGEF28Q8N1W1 1705 aaKnown RBP17.39■□□□□ 0.37
SIN3A-203ENST00000394949 MLYCDO95822 493 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 GSTM1P09488 218 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 CDH8P55286 799 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 GRIK4Q16099 956 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 PHKG1Q16816 387 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 UNC93AQ86WB7 457 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 KRT78Q8N1N4 520 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 SNRNP25Q9BV90 132 aaKnown RBP17.39■□□□□ 0.37
SIN3A-203ENST00000394949 MRIQ9BWK5 157 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 POPDC2Q9HBU9 364 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 SETD4Q9NVD3 440 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 PNPOQ9NVS9 261 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 CPA4Q9UI42 421 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 DYRK1BQ9Y463 629 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 SF3B1O75533 1304 aaKnown RBP eCLIP17.39■□□□□ 0.378e-6■■■■■ 86.2
SIN3A-203ENST00000394949 LYPLA1O75608 230 aaPredicted RBP17.39■□□□□ 0.37
SIN3A-203ENST00000394949 IL6P05231 212 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 ZNF12P17014 697 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 NOS2P35228 1153 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 DENND5AQ6IQ26 1287 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 SLC27A1Q6PCB7 646 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 MUC13Q9H3R2 512 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 PNPLA8Q9NP80 782 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 MAPRE3Q9UPY8 281 aa17.39■□□□□ 0.37
SIN3A-203ENST00000394949 PPLO60437 1756 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms