RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 POLR2BP30876 1174 aaKnown RBP11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 JAK3P52333 1124 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 SESN2P58004 480 aaPredicted RBP11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 PRKCEQ02156 737 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 DPY19L1Q2PZI1 675 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 SMUG1Q53HV7 270 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 NCBP2-AS2Q69YL0 99 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 ZBTB49Q6ZSB9 765 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 CCDC80Q76M96 950 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 VASH1Q7L8A9 365 aaPredicted RBP11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 ERMP1Q7Z2K6 904 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 CMTR2Q8IYT2 770 aaKnown RBP11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 DHRS1Q96LJ7 313 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 QKIQ96PU8 341 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■■■■■ 48.3
SMARCA1-201ENST00000371121 LGMNQ99538 433 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 PDCD2LQ9BRP1 358 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 C11orf84Q9BUA3 381 aaPredicted RBP11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 POLR1BQ9H9Y6 1135 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 PALMDQ9NP74 551 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 LTB4R2Q9NPC1 389 aa11.84□□□□□ -0.51
SMARCA1-201ENST00000371121 APOL1O14791 398 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 PAPSS1O43252 624 aaPredicted RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 C2P06681 752 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CYP2C9P11712 490 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 ARL2P36404 184 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 BMPR1AP36894 532 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CCT8P50990 548 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 BCAR1P56945 870 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 TRAF2Q12933 501 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CBX2Q14781 532 aaPredicted RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 FAM102AQ5T9C2 384 aaPredicted RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 REP15Q6BDI9 236 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 RPS27LQ71UM5 84 aaKnown RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 OR9I1Q8NGQ6 314 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 UBA3Q8TBC4 463 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 EFCAB1Q9HAE3 211 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 PXMP2Q9NR77 195 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 ADA2Q9NZK5 511 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 NME7Q9Y5B8 376 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 PCDHA10Q9Y5I2 948 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 COL2A1P02458 1487 aaPredicted RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 SBF1O95248 1867 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 A0A096LPK6 155 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 TCEA1P23193 301 aaKnown RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 HPCAL1P37235 193 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 LIMK2P53671 638 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 ATP6AP1Q15904 470 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 INTS11Q5TA45 600 aaKnown RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 PMF1Q6P1K2 205 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 WDR49Q8IV35 697 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 FUNDC1Q8IVP5 155 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 DNERQ8NFT8 737 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CPB2Q96IY4 423 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CGREF1Q99674 301 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 UNC93B1Q9H1C4 597 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 NMRAL1Q9HBL8 299 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 PMF1-BGLAPU3KQ54 211 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CNTNAP1P78357 1384 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 MSCO60682 206 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 TMED10P49755 219 aaKnown RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 EMC2Q15006 297 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 RGS21Q2M5E4 152 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 UGT3A2Q3SY77 523 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CNSTQ6PJW8 725 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 FAM196AQ6ZSG2 479 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 SPRED1Q7Z699 444 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 C7orf31Q8N865 590 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 STON2Q8WXE9 905 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 TOP1MTQ969P6 601 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 TP53INP1Q96A56 240 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 MFSD3Q96ES6 412 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 CERS2Q96G23 380 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 TRIM8Q9BZR9 551 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 IL22Q9GZX6 179 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 ILKAPQ9H0C8 392 aaPredicted RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 PORCNQ9H237 461 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 EHMT1Q9H9B1 1298 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 AKIP1Q9NQ31 210 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 UTP6Q9NYH9 597 aaKnown RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 MORF4L1Q9UBU8 362 aa11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 SEPT9Q9UHD8 586 aaPredicted RBP11.83□□□□□ -0.52
SMARCA1-201ENST00000371121 A0A1W2PQ67 120 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 MYCLP12524 364 aaPredicted RBP11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 PGAM1P18669 254 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 SFNP31947 248 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 IREB2P48200 963 aaKnown RBP11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 NAGLUP54802 743 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 IRAK1BP1Q5VVH5 260 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 THOC7Q6I9Y2 204 aaKnown RBP11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 C16orf87Q6PH81 154 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 TTC33Q6PID6 262 aaPredicted RBP11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 ABHD15Q6UXT9 468 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 SPPL2BQ8TCT7 592 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 SH3YL1Q96HL8 342 aaPredicted RBP11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 SLC45A3Q96JT2 553 aa11.82□□□□□ -0.52
SMARCA1-201ENST00000371121 IL12RB2Q99665 862 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms