RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 HLTFQ14527 1009 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRCC3-204ENST00000369462 RNF135Q8IUD6 432 aa11.13□□□□□ -0.63
BRCC3-204ENST00000369462 PHTF2Q8N3S3 785 aa11.13□□□□□ -0.63
BRCC3-204ENST00000369462 SPATA22Q8NHS9 363 aa11.13□□□□□ -0.63
BRCC3-204ENST00000369462 GBA3Q9H227 469 aa11.13□□□□□ -0.63
BRCC3-204ENST00000369462 FAM114A2Q9NRY5 505 aa11.13□□□□□ -0.63
BRCC3-204ENST00000369462 SLC25A13Q9UJS0 675 aa11.13□□□□□ -0.63
BRCC3-204ENST00000369462 TPX2Q9ULW0 747 aaKnown RBP11.13□□□□□ -0.63
BRCC3-204ENST00000369462 ATP8A1Q9Y2Q0 1164 aa11.13□□□□□ -0.63
BRCC3-204ENST00000369462 PIAS3Q9Y6X2 628 aa11.13□□□□□ -0.63
BRCC3-204ENST00000369462 UQCRHLA0A096LP55 91 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-204ENST00000369462 E7EVH7 732 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 SPECC1L-ADORA2AF8WAN1 911 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 DNALI1O14645 258 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-204ENST00000369462 UQCRHP07919 91 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 DLDP09622 509 aaKnown RBP11.12□□□□□ -0.63
BRCC3-204ENST00000369462 SRCP12931 536 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 ITIH2P19823 946 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 CTHP32929 405 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 GALK1P51570 392 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 ITGA8P53708 1063 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 ZP2Q05996 745 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 ACCSLQ4AC99 568 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 IER5LQ5T953 404 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 TXNDC11Q6PKC3 985 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 CPT1BQ92523 772 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 TM6SF2Q9BZW4 377 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 POLR1EQ9GZS1 481 aaKnown RBP11.12□□□□□ -0.63
BRCC3-204ENST00000369462 WHRNQ9P202 907 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 ANAPC5Q9UJX4 755 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 PLA2G4CQ9UP65 541 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 HS3ST2Q9Y278 367 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 TICRRQ7Z2Z1 1910 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-204ENST00000369462 TP73O15350 636 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 GJB3O75712 270 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 MT-CYBP00156 380 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-204ENST00000369462 FDFT1P37268 417 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 RGRP47804 291 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 SCNN1BP51168 640 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 RHOAP61586 193 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 DSC2Q02487 901 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 ANKRD22Q5VYY1 191 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 SH2D3CQ8N5H7 860 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 FBXO25Q8TCJ0 367 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 DNASE1L2Q92874 299 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 SEMA3CQ99985 751 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 P2RY13Q9BPV8 354 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 PRKAG3Q9UGI9 489 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 NFU1Q9UMS0 254 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 ERVW-1Q9UQF0 538 aa11.12□□□□□ -0.63
BRCC3-204ENST00000369462 TCRBV7S3A2A0A539 114 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 SRFP11831 508 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 GRIA2P42262 883 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 LMAN1P49257 510 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 PFKPQ01813 784 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 SEMA5AQ13591 1074 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 CUL1Q13616 776 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 PREPLQ4J6C6 727 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 RNASEH2BQ5TBB1 312 aaKnown RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 PPIL6Q8IXY8 311 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 PDCD7Q8N8D1 485 aaKnown RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 OXNAD1Q96HP4 312 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 FCRL5Q96RD9 977 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 RBM15Q96T37 977 aaKnown RBP eCLIP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 MGME1Q9BQP7 344 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 GORASP1Q9BQQ3 440 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 SLC25A51Q9H1U9 297 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 HAUS2Q9NVX0 235 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 ANTXRLA6NF34 631 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 GOLGA8MH3BSY2 632 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 TIMM44O43615 452 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 BNIP3LO60238 219 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 APODP05090 189 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 MYBL2P10244 700 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 NNMTP40261 264 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 NIPAL4Q0D2K0 466 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 EIF4HQ15056 248 aaKnown RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 DLG2Q15700 870 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 PTPRNQ16849 979 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 DGKKQ5KSL6 1271 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 ATXN7L2Q5T6C5 722 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 WDR93Q6P2C0 686 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 ZDHHC24Q6UX98 284 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 PCGF5Q86SE9 256 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 METTL3Q86U44 580 aaKnown RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 RALGPS2Q86X27 583 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 GSPT2Q8IYD1 628 aaKnown RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 BBOF1Q8ND07 529 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 ARRDC2Q8TBH0 407 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 EXOC4Q96A65 974 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 TNKS2Q9H2K2 1166 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 FARP1Q9Y4F1 1045 aaPredicted RBP11.11□□□□□ -0.63
BRCC3-204ENST00000369462 COL4A3Q01955 1670 aa11.11□□□□□ -0.63
BRCC3-204ENST00000369462 CXorf51AA0A1B0GTR3 108 aa11.1□□□□□ -0.63
BRCC3-204ENST00000369462 PMPCBO75439 489 aa11.1□□□□□ -0.63
BRCC3-204ENST00000369462 ZNF821O75541 412 aaPredicted RBP11.1□□□□□ -0.63
BRCC3-204ENST00000369462 ASLP04424 464 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms