RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 CRLS1Q9UJA2 301 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 LSM7Q9UK45 103 aaKnown RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 ADAM28Q9UKQ2 775 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 TRIM16O95361 564 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 TPBGLP0DKB5 382 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 TFEBP19484 476 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 WARSP23381 471 aaKnown RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 CDH13P55290 713 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 RAB10P61026 200 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 RHOAP61586 193 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 PLOD1Q02809 727 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 SOX4Q06945 474 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 INPP5AQ14642 412 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 NOMO2Q5JPE7 1267 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 ESRP1Q6NXG1 681 aaKnown RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 CYGBQ8WWM9 190 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 C7orf26Q96N11 449 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 ZNF184Q99676 751 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 TAS2R1Q9NYW7 299 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 UXTQ9UBK9 157 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 ANKRD6Q9Y2G4 727 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 SH3BP1Q9Y3L3 701 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 HDAC3O15379 428 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 CRTAMO95727 393 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 CYP3A5P20815 502 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 CYP2C18P33260 490 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 PFKFB4Q16877 469 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 SLC9A4Q6AI14 798 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 RGMBQ6NW40 437 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 CAND1Q86VP6 1230 aaKnown RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 DENND6AQ8IWF6 608 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 ELMOD1Q8N336 334 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 DRC3Q9H069 523 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 CAAP1Q9H8G2 361 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 USP29Q9HBJ7 922 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 KANSL3Q9P2N6 904 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 TYROBPO43914 113 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 PROZP22891 400 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 CHRNA4P43681 627 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 ZNF135P52742 658 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 GRIK3Q13003 919 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 GALNT3Q14435 633 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 INTS6LQ5JSJ4 861 aaKnown RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 DCLRE1AQ6PJP8 1040 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 NXNL1Q96CM4 212 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 FAR2Q96K12 515 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 ZYG11BQ9C0D3 744 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 POLR1EQ9GZS1 481 aaKnown RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 GBA3Q9H227 469 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 RHOJQ9H4E5 214 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 COPS7BQ9H9Q2 264 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.57□□□□□ -1.041e-6■■□□□ 12.2
PTPRK-206ENST00000368215 FBXW11Q9UKB1 542 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 ORC6Q9Y5N6 252 aa8.57□□□□□ -1.04
PTPRK-206ENST00000368215 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.57□□□□□ -1.04
PTPRK-206ENST00000368215 LAMB2P55268 1798 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 MYH9P35579 1960 aaKnown RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 H7C4K7 107 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ITM2AO43736 263 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 BEST1O76090 585 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 VAV1P15498 845 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SLC10A2Q12908 348 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 KCNA10Q16322 511 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SLC30A9Q6PML9 568 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 CDHR3Q6ZTQ4 885 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 GLT6D1Q7Z4J2 308 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 DDI1Q8WTU0 396 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 JADE3Q92613 823 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 RCN3Q96D15 328 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 RBBP8Q99708 897 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SIKE1Q9BRV8 207 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 NMRK1Q9NWW6 199 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 GMIPQ9P107 970 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 CNTN3Q9P232 1028 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ZNF212Q9UDV6 495 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SLC8A2Q9UPR5 921 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 MYO18AQ92614 2054 aaKnown RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 KATNA1O75449 491 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 TGDSO95455 350 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 GUCA1CO95843 209 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ANPEPP15144 967 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 NFKBIAP25963 317 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 IRF9Q00978 393 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 LIPMQ5VYY2 423 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 PKN3Q6P5Z2 889 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 CIR1Q86X95 450 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 RELL1Q8IUW5 271 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ZNF781Q8N8C0 355 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SEPT8Q92599 483 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 ABTB1Q969K4 478 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SIGLEC10Q96LC7 697 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 TRIM54Q9BYV2 358 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 CDH19Q9H159 772 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 WDR41Q9HAD4 459 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 SEMA4BQ9NPR2 832 aaPredicted RBP8.56□□□□□ -1.04
PTPRK-206ENST00000368215 GID8Q9NWU2 228 aa8.56□□□□□ -1.04
PTPRK-206ENST00000368215 VTI1BQ9UEU0 232 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms