RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 KCTD11Q693B1 232 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 ZNF783Q6ZMS7 281 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 ZNF534Q76KX8 674 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 HJURPQ8NCD3 748 aaPredicted RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 OR2W6PQ8NHA6 318 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 PYROXD1Q8WU10 500 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 ARHGEF2Q92974 986 aaKnown RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 TCEAL4Q96EI5 215 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 PHF7Q9BWX1 381 aaPredicted RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 ROPN1BQ9BZX4 212 aaPredicted RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 ROPN1Q9HAT0 212 aaPredicted RBP12.28□□□□□ -0.44
USF1-203ENST00000368021 SP110Q9HB58 689 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 LRRC4CQ9HCJ2 640 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 GOLGA6AQ9NYA3 693 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 CFAP97Q9P2B7 532 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 TEX264Q9Y6I9 313 aa12.28□□□□□ -0.44
USF1-203ENST00000368021 E2F8A0AVK6 867 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 LEFTY2O00292 366 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 PSMD3O43242 534 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 TCEA3O75764 348 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 MYZAPP0CAP1 466 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 TCF3P15923 654 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 NFKB1P19838 968 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 MTHFRP42898 656 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 SGSHP51688 502 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 ZP2Q05996 745 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 PRPSAP1Q14558 356 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 TEAD2Q15562 447 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 BBS9Q3SYG4 887 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 MPP7Q5T2T1 576 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 UBAP2Q5T6F2 1119 aaKnown RBP12.27□□□□□ -0.44
USF1-203ENST00000368021 LRRC8BQ6P9F7 803 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 TEX26Q8N6G2 289 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.44
USF1-203ENST00000368021 ATP11CQ8NB49 1132 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 NSMCE1Q8WV22 266 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 ZNF419Q96HQ0 510 aaPredicted RBP12.27□□□□□ -0.44
USF1-203ENST00000368021 ZNF599Q96NL3 588 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 NECTIN4Q96NY8 510 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 FCRL5Q96RD9 977 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 GORASP1Q9BQQ3 440 aa12.27□□□□□ -0.44
USF1-203ENST00000368021 RBM22Q9NW64 420 aaKnown RBP eCLIP12.27□□□□□ -0.44
USF1-203ENST00000368021 AAR2Q9Y312 384 aaKnown RBP12.27□□□□□ -0.44
USF1-203ENST00000368021 J3KR12 359 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 TRDMT1O14717 391 aaKnown RBP12.27□□□□□ -0.45
USF1-203ENST00000368021 PRAMEF11O60813 436 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 SPAG6O75602 509 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 ANXA9O76027 345 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 SHBGP04278 402 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 SYCP2LQ5T4T6 812 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 MARC1Q5VT66 337 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 RNF43Q68DV7 783 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 GET4Q7L5D6 327 aaPredicted RBP12.27□□□□□ -0.45
USF1-203ENST00000368021 ADHFE1Q8IWW8 467 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 GJD3Q8N144 294 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 FBXO36Q8NEA4 188 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 ZNF483Q8TF39 744 aaPredicted RBP12.27□□□□□ -0.45
USF1-203ENST00000368021 TMA16Q96EY4 203 aaKnown RBP12.27□□□□□ -0.45
USF1-203ENST00000368021 ANKRD27Q96NW4 1050 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 WDR83Q9BRX9 315 aaKnown RBP12.27□□□□□ -0.45
USF1-203ENST00000368021 PDFQ9HBH1 243 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 TMBIM4Q9HC24 238 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 GLOD4Q9HC38 313 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 TDP1Q9NUW8 608 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 CHCHD3Q9NX63 227 aaKnown RBP12.27□□□□□ -0.45
USF1-203ENST00000368021 C2orf16Q68DN1 1984 aa12.27□□□□□ -0.45
USF1-203ENST00000368021 A0A0D9SEW6 157 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 AP3B1O00203 1094 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 TSPAN3O60637 253 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 RNF40O75150 1001 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 AVILO75366 819 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 HLA-DQB2P05538 268 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 RHOCP08134 193 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 HOXD9P28356 352 aaPredicted RBP12.26□□□□□ -0.45
USF1-203ENST00000368021 WEE1P30291 646 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 PHBP35232 272 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 ACVRL1P37023 503 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 STAT4Q14765 748 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 KRT71Q3SY84 523 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 CXorf57Q6NSI4 855 aaKnown RBP12.26□□□□□ -0.45
USF1-203ENST00000368021 ZNF354CQ86Y25 554 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 BBS7Q8IWZ6 715 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 DRAXINQ8NBI3 349 aaPredicted RBP12.26□□□□□ -0.45
USF1-203ENST00000368021 FAM76AQ8TAV0 307 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 SH3RF2Q8TEC5 729 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 DTNBP1Q96EV8 351 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 CCDC77Q9BR77 488 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 ACE2Q9BYF1 805 aaPredicted RBP12.26□□□□□ -0.45
USF1-203ENST00000368021 LRRC40Q9H9A6 602 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 PPCSQ9HAB8 311 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 WDFY4Q6ZS81 3184 aa12.26□□□□□ -0.45
USF1-203ENST00000368021 C2CD4DB7Z1M9 353 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 TBL1XO60907 577 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 BANF1O75531 89 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 LUC7L3O95232 432 aaKnown RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 GBP2P32456 591 aaPredicted RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 ELK3P41970 407 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 CLNS1AP54105 237 aaKnown RBP12.25□□□□□ -0.45
USF1-203ENST00000368021 MPPE1Q53F39 396 aa12.25□□□□□ -0.45
USF1-203ENST00000368021 TMCO4Q5TGY1 634 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms