RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 RFTN1Q14699 578 aaPredicted RBP18.9■□□□□ 0.62
CLN3-206ENST00000360019 DHCR24Q15392 516 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 CYTH1Q15438 398 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 PLEKHG6Q3KR16 790 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 TANGO2Q6ICL3 276 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 ARRDC2Q8TBH0 407 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 FAM161BQ96MY7 647 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 PSKH2Q96QS6 385 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 POLR1EQ9GZS1 481 aaKnown RBP18.9■□□□□ 0.62
CLN3-206ENST00000360019 LRRC40Q9H9A6 602 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 LRRC4CQ9HCJ2 640 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 ABCB8Q9NUT2 735 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 OBP2AQ9NY56 170 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 SEPT3Q9UH03 358 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 CHMP2BQ9UQN3 213 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 CYP17A1P05093 508 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 ALG1LQ6GMV1 187 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 MPP5Q8N3R9 675 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 OR52K1Q8NGK4 314 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 PYROXD1Q8WU10 500 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 ZFYVE19Q96K21 471 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 SIGLEC10Q96LC7 697 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 RIPOR3Q96MK2 946 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 APOL2Q9BQE5 337 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 MGME1Q9BQP7 344 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 C2orf49Q9BVC5 232 aaPredicted RBP18.9■□□□□ 0.62
CLN3-206ENST00000360019 POMKQ9H5K3 350 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 CASS4Q9NQ75 786 aa18.9■□□□□ 0.62
CLN3-206ENST00000360019 GOLGA6CA6NDK9 693 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 GOLGA6DP0CG33 693 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 CD86P42081 329 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 RGRP47804 291 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 PLK1P53350 603 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 GEMP55040 296 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 GPX6P59796 221 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 CCDC38Q502W7 563 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 LRIG3Q6UXM1 1119 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 MICALL1Q8N3F8 863 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 IPMKQ8NFU5 416 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 TADA1Q96BN2 335 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 LRCH3Q96II8 777 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 MRGPRX2Q96LB1 330 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 TTC25Q96NG3 672 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 PPP1R2P1Q96PQ5 205 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 CINPQ9BW66 212 aaPredicted RBP18.89■□□□□ 0.61
CLN3-206ENST00000360019 ACBD3Q9H3P7 528 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 GOLGA6AQ9NYA3 693 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 FAM53CQ9NYF3 392 aa18.89■□□□□ 0.61
CLN3-206ENST00000360019 PSMD3O43242 534 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 PMPCBO75439 489 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 TMCC1O94876 653 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 MT-CO1P00395 513 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 ARSAP15289 507 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 ADRA1AP35348 466 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 SESN2P58004 480 aaPredicted RBP18.88■□□□□ 0.61
CLN3-206ENST00000360019 ZNF844Q08AG5 666 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 SLC12A1Q13621 1099 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 FUT11Q495W5 492 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 INO80DQ53TQ3 878 aaPredicted RBP18.88■□□□□ 0.61
CLN3-206ENST00000360019 DNAJC21Q5F1R6 531 aaKnown RBP18.88■□□□□ 0.61
CLN3-206ENST00000360019 PITRM1Q5JRX3 1037 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 NAPEPLDQ6IQ20 393 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 KDELC1Q6UW63 502 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 VITQ6UXI7 678 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 CAPN12Q6ZSI9 719 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 DENND4AQ7Z401 1863 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 BBS5Q8N3I7 341 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 SMRP1Q8NCR6 262 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 ACDQ96AP0 544 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 SEMA3CQ99985 751 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 ZFP14Q9HCL3 533 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 CR2P20023 1033 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 MGAT1P26572 445 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 GBP2P32456 591 aaPredicted RBP18.88■□□□□ 0.61
CLN3-206ENST00000360019 MTHFRP42898 656 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 SKOR1P84550 965 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 MPP3Q13368 585 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 NAT16Q8N8M0 369 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 LRRC39Q96DD0 335 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 EXOC2Q96KP1 924 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 RUFY1Q96T51 708 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 TBL1YQ9BQ87 522 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 FAM83CQ9BQN1 747 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 EBF3Q9H4W6 596 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 PLAC1Q9HBJ0 212 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 VPS45Q9NRW7 570 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 GGA2Q9UJY4 613 aa18.88■□□□□ 0.61
CLN3-206ENST00000360019 KIF26AQ9ULI4 1882 aaPredicted RBP18.87■□□□□ 0.61
CLN3-206ENST00000360019 TRIM24O15164 1050 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 SYF2O95926 243 aaKnown RBP18.87■□□□□ 0.61
CLN3-206ENST00000360019 AGTP01019 485 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 ABHD2P08910 425 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 ADH5P11766 374 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 LAMP2P13473 410 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 SSTR1P30872 391 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 WNT3AP56704 352 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 CRADDP78560 199 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 FCHO2Q0JRZ9 810 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 RETSATQ6NUM9 610 aa18.87■□□□□ 0.61
CLN3-206ENST00000360019 MTERF4Q7Z6M4 381 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms