RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ATP6V0D2Q8N8Y2 350 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 MLKLQ8NB16 471 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 TMEM145Q8NBT3 493 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 SLC35C1Q96A29 364 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 FAM131CQ96AQ9 280 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 OSBPL2Q9H1P3 480 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 POLR1BQ9H9Y6 1135 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 POPDC2Q9HBU9 364 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 THSD1Q9NS62 852 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 EVA1BQ9NVM1 165 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 OGFRQ9NZT2 677 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 PPM1HQ9ULR3 514 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 SPTA1P02549 2419 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 PIEZO2Q9H5I5 2752 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 KCNU1A8MYU2 1149 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 RNF225M0QZC1 329 aaPredicted RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 MCF2LO15068 1137 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 ALOX15BO15296 676 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 RNGTTO60942 597 aaKnown RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 CSO75390 466 aaKnown RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 DXOO77932 396 aaKnown RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 SLU7O95391 586 aaKnown RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 TRUB2O95900 331 aaKnown RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 GP1BAP07359 652 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 FMO5P49326 533 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 ETF1P62495 437 aaKnown RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 DMTNQ08495 405 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 CCDC15Q0P6D6 951 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 LY6DQ14210 128 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 CT47A1Q5JQC4 288 aaPredicted RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 ZNF454Q8N9F8 522 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 LRRN4CLQ8ND94 238 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 ZNF592Q92610 1267 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 KLK6Q92876 244 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 KAT5Q92993 513 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 WBP1Q96G27 269 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 RPRD1AQ96P16 312 aaPredicted RBP8.03□□□□□ -1.12
CLK1-215ENST00000621181 FZD3Q9NPG1 666 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 KLHL11Q9NVR0 708 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 RMND1Q9NWS8 449 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 NLGN3Q9NZ94 848 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 VPS28Q9UK41 221 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 MYO18BQ8IUG5 2567 aa8.03□□□□□ -1.12
CLK1-215ENST00000621181 SYNJ2BP-COX16A0A087WUM0 186 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 A0A1W2PQU0 124 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 KPNA3O00505 521 aaPredicted RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 ATP9BO43861 1147 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 PIAS2O75928 621 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 SLC2A3P11169 496 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 C6P13671 934 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 H2AFXP16104 143 aaPredicted RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 HNRNPA2B1P22626 353 aaKnown RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 ERCC5P28715 1186 aaPredicted RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 AKT2P31751 481 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 PBX1P40424 430 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 GPD2P43304 727 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 LSSP48449 732 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 DUSP3P51452 185 aaPredicted RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 PLK1P53350 603 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 PMS1P54277 932 aaKnown RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 TAS2R38P59533 333 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 YWHAZP63104 245 aaKnown RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 CBX1P83916 185 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 CENPCQ03188 943 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 LRRC63Q05C16 580 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 VAC14Q08AM6 782 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 ZNF177Q13360 481 aaPredicted RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 NR1I3Q14994 352 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 DLG2Q15700 870 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 C3orf38Q5JPI3 329 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 CDCP2Q5VXM1 449 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 ANKRD40Q6AI12 368 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 CXorf57Q6NSI4 855 aaKnown RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 SYT10Q6XYQ8 523 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 BEND5Q7L4P6 421 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 RRAGAQ7L523 313 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 TC2NQ8N9U0 490 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 FAM181AQ8N9Y4 354 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 ZNF397Q8NF99 534 aaPredicted RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 OR13H1Q8NG92 308 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 MAPK15Q8TD08 544 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 APOLD1Q96LR9 279 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 CCDC114Q96M63 670 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 FEM1AQ9BSK4 669 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 DUSP23Q9BVJ7 150 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 DPH1Q9BZG8 443 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 SEMA4CQ9C0C4 833 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 CLMPQ9H6B4 373 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 FAM204AQ9H8W3 233 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 METTL14Q9HCE5 456 aaKnown RBP8.02□□□□□ -1.13
CLK1-215ENST00000621181 DYRK4Q9NR20 520 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.02□□□□□ -1.13
CLK1-215ENST00000621181 DDIT4Q9NX09 232 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 DNAJC28Q9NX36 388 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 COX16Q9P0S2 106 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 TRPM6Q9BX84 2022 aa8.02□□□□□ -1.13
CLK1-215ENST00000621181 A0A1B0GTH6 734 aa8.01□□□□□ -1.13
CLK1-215ENST00000621181 TRIM49BA6NDI0 452 aa8.01□□□□□ -1.13
CLK1-215ENST00000621181 B8ZZF3 427 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms