RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 AGPAT1Q99943 283 aa19.49■□□□□ 0.71
CCDC28A-203ENST00000617445 BPIFA3Q9BQP9 254 aa19.49■□□□□ 0.71
CCDC28A-203ENST00000617445 HSD3B7Q9H2F3 369 aa19.49■□□□□ 0.71
CCDC28A-203ENST00000617445 ATP13A1Q9HD20 1204 aa19.49■□□□□ 0.71
CCDC28A-203ENST00000617445 AKAP13Q12802 2813 aa19.49■□□□□ 0.71
CCDC28A-203ENST00000617445 GOLGA4Q13439 2230 aaKnown RBP19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 SMTNL1A8MU46 457 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 PRAMEF26H0Y7S4 382 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 K7ERQ8 282 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 KPNA3O00505 521 aaPredicted RBP19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 CTSLP07711 333 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 GPD1P21695 349 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 RFC1P35251 1148 aaPredicted RBP19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 SERPINH1P50454 418 aaKnown RBP19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 PPP2CBP62714 309 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 PPP2CAP67775 309 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 STAT4Q14765 748 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 LINGO4Q6UY18 593 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 SLCO6A1Q86UG4 719 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 ISG20Q96AZ6 181 aaKnown RBP19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 HDAC8Q9BY41 377 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 MAGEH1Q9H213 219 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 TMEM248Q9NWD8 314 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 IL36AQ9UHA7 158 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 HPCAL4Q9UM19 191 aa19.48■□□□□ 0.71
CCDC28A-203ENST00000617445 PLK4O00444 970 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 KRT37O76014 449 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 DKK1O94907 266 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 PLEKP08567 350 aaPredicted RBP19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 DESP17661 470 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 RXRGP48443 463 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 AIF1P55008 147 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 HDAC4P56524 1084 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 NXPH1P58417 271 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 SCAPQ12770 1279 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 PIP5KL1Q5T9C9 394 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 RWDD4Q6NW29 188 aaKnown RBP19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 WDR59Q6PJI9 974 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 MON1BQ7L1V2 547 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 PHLDB2Q86SQ0 1253 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 DRC7Q8IY82 874 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 AOPEPQ8N6M6 819 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 FAM172AQ8WUF8 416 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 TBC1D31Q96DN5 1066 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 SEPT11Q9NVA2 429 aaKnown RBP19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 BTBD3Q9Y2F9 522 aa19.47■□□□□ 0.71
CCDC28A-203ENST00000617445 TRPM6Q9BX84 2022 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 LRIG2O94898 1065 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 GLDCP23378 1020 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 ZNF143P52747 638 aaPredicted RBP19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 TAS2R38P59533 333 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 POM121L1PQ3SYA9 428 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 CARD16Q5EG05 197 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 ARSIQ5FYB1 569 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 DPY19L3Q6ZPD9 716 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 ERN2Q76MJ5 926 aaKnown RBP19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 SLFN11Q7Z7L1 901 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 ZSCAN30Q86W11 494 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 NLRP14Q86W24 1093 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 PNPLA1Q8N8W4 532 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 FAM174AQ8TBP5 190 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 VCPIP1Q96JH7 1222 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 HEPHQ9BQS7 1158 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 TOR4AQ9NXH8 423 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 ZMIZ1Q9ULJ6 1067 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 PTPRBP23467 1997 aa19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 COL5A1P20908 1838 aaPredicted RBP19.46■□□□□ 0.71
CCDC28A-203ENST00000617445 ARID1BQ8NFD5 2236 aaPredicted RBP19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ZSCAN5CA6NGD5 496 aaPredicted RBP19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 WNT9AO14904 365 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ZNF821O75541 412 aaPredicted RBP19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ITGAVP06756 1048 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ATXN1LP0C7T5 689 aaKnown RBP19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 CDK4P11802 303 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ATP1A3P13637 1013 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 MAT2AP31153 395 aaKnown RBP19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 L1CAMP32004 1257 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ARF5P84085 180 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ANO6Q4KMQ2 910 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 FILIP1LQ4L180 1135 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ACAD10Q6JQN1 1059 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 DNAJC24Q6P3W2 148 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 CCNI2Q6ZMN8 369 aaPredicted RBP19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 IRF2BP2Q7Z5L9 587 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 GALNT15Q8N3T1 639 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 CHST14Q8NCH0 376 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 SAP25Q8TEE9 199 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 ARRDC3Q96B67 414 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 LRIG1Q96JA1 1093 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 CNPY3Q9BT09 278 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 TNKS2Q9H2K2 1166 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 RTN4Q9NQC3 1192 aaKnown RBP19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 TMEM63CQ9P1W3 806 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 FTSJ1Q9UET6 329 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 CHD6Q8TD26 2715 aa19.45■□□□□ 0.7
CCDC28A-203ENST00000617445 TCRBV5S1A1TA0A578 114 aa19.44■□□□□ 0.7
CCDC28A-203ENST00000617445 FAM72CH0Y354 149 aa19.44■□□□□ 0.7
CCDC28A-203ENST00000617445 RAMP2O60895 175 aa19.44■□□□□ 0.7
CCDC28A-203ENST00000617445 LEFTY1O75610 366 aa19.44■□□□□ 0.7
CCDC28A-203ENST00000617445 GJB6O95452 261 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms