RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 KCNT2Q6UVM3 1135 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 KIAA0408Q6ZU52 694 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 R3HCC1LQ7Z5L2 792 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 NECAB2Q7Z6G3 386 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TLK2Q86UE8 772 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CD101Q93033 1021 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ART4Q93070 314 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 RNF145Q96MT1 663 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 APBA2Q99767 749 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 RACGAP1Q9H0H5 632 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 STON1Q9Y6Q2 735 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ADCY6O43306 1168 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ABCB1P08183 1280 aaPredicted RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 COX7A2P14406 83 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ZNF24P17028 368 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 ATP6V1C1P21283 382 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TSHZ1Q6ZSZ6 1077 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PEG10Q86TG7 708 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 LGI2Q8N0V4 545 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 METTL6Q8TCB7 284 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SPPL2AQ8TCT8 520 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLC2A14Q8TDB8 520 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLC35C1Q96A29 364 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 OSMRQ99650 979 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 APOL2Q9BQE5 337 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 NEK6Q9HC98 313 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CNGB3Q9NQW8 809 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 IL17RBQ9NRM6 502 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 COL14A1Q05707 1796 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 BBIP1A8MTZ0 92 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TEX28O15482 410 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 IDO1P14902 403 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 NPR3P17342 541 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PSEN2P49810 448 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 HNMTP50135 292 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CSNK2BP67870 215 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 PLIN5Q00G26 463 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 FAAP100Q0VG06 881 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 HYIQ5T013 277 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 IRAK1BP1Q5VVH5 260 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TMC5Q6UXY8 1006 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SAMD7Q7Z3H4 446 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TRMT11Q7Z4G4 463 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 SLC9A9Q8IVB4 645 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 KAT2BQ92831 832 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 FAIM2Q9BWQ8 316 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 REXO4Q9GZR2 422 aaKnown RBP4.63□□□□□ -1.67
CHD9-221ENST00000615216 OSGEPL1Q9H4B0 414 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 LRRC19Q9H756 370 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 RNPEPL1Q9HAU8 725 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 CDH9Q9ULB4 789 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 NCKAP1Q9Y2A7 1128 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 SIK3Q9Y2K2 1263 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 BCL9O00512 1426 aa4.63□□□□□ -1.67
CHD9-221ENST00000615216 TRAV19A0A0A6YYK7 116 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 H3BN98 237 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 DDX3XO00571 662 aaKnown RBP eCLIP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PCDH8O95206 1070 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 RTP1P59025 263 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 NEDD8Q15843 81 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 LIPMQ5VYY2 423 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ADGRA1Q86SQ6 560 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PHF13Q86YI8 300 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 FAM71AQ8IYT1 594 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FNIP1Q8TF40 1166 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 HDAC7Q8WUI4 952 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 WNT8BQ93098 351 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PTCD3Q96EY7 689 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 DUSP9Q99956 384 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PDCD2LQ9BRP1 358 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 OSBPL11Q9BXB4 747 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TRIT1Q9H3H1 467 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PNPLA3Q9NST1 481 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 DNMT3LQ9UJW3 386 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZNF232Q9UNY5 417 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TRIM43BA6NCK2 446 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FAM86B1E9PN63 330 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 TGDSO95455 350 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FAM86B2P0C5J1 330 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 USP17L7P0C7H9 530 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ATP4AP20648 1035 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 RPL9P32969 192 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 RFX3P48380 749 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CCR3P51677 355 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ELF3P78545 371 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 DCTN2Q13561 401 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 RFX4Q33E94 735 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 FGD3Q5JSP0 725 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 IQSEC1Q6DN90 963 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 EIF3MQ7L2H7 374 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZNF614Q8N883 585 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 CENPIQ92674 756 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 CELF6Q96J87 481 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 PNMA5Q96PV4 448 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 ABHD16BQ9H3Z7 469 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 GBA2Q9HCG7 927 aaPredicted RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 STARD7Q9NQZ5 370 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 UBP1Q9NZI7 540 aa4.62□□□□□ -1.67
CHD9-221ENST00000615216 PRPF19Q9UMS4 504 aaKnown RBP4.62□□□□□ -1.67
CHD9-221ENST00000615216 ZSCAN5CA6NGD5 496 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 210.9 ms