RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 INTS6Q9UL03 887 aaKnown RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 MKLN1Q9UL63 735 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 DHDHQ9UQ10 334 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 CLDN16Q9Y5I7 305 aa5.42□□□□□ -1.54
LINC00397-202ENST00000606785 MAGED1Q9Y5V3 778 aaPredicted RBP5.42□□□□□ -1.54
LINC00397-202ENST00000606785 A0A0U1RQG5 324 aaPredicted RBP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 A0A1W2PQ09 198 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 A0A1W2PQF6 199 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 TTC36A6NLP5 189 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 H7C0S8 307 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 MASP2O00187 686 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 PAGE4O60829 102 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 CBX6O95503 412 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ELFN1P0C7U0 828 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 HKR1P10072 659 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 DRD4P21917 467 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 UBA7P41226 1012 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 SKIV2L2P42285 1042 aaKnown RBP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 DPP6P42658 865 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 EFNA5P52803 228 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 CYP4F2P78329 520 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ROR1Q01973 937 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 RHAGQ02094 409 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ZBTB16Q05516 673 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 LRMPQ12912 555 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 IRF3Q14653 427 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ZXDCQ2QGD7 858 aaPredicted RBP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ARL13AQ5H913 290 aaPredicted RBP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ZNF474Q6S9Z5 364 aaPredicted RBP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 IL20RBQ6UXL0 311 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 RANBP10Q6VN20 620 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 NAPRTQ6XQN6 538 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 RNF207Q6ZRF8 634 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 CHST9Q7L1S5 443 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 PRSS45Q7RTY3 260 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 MRGPREQ86SM8 312 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 FAM160B2Q86V87 743 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 KLBQ86Z14 1044 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 RFX6Q8HWS3 928 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ACTRT2Q8TDY3 377 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 DAZAP1Q96EP5 407 aaKnown RBP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 C8orf49Q96NF6 230 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 WDFY2Q96P53 400 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ZNF347Q96SE7 839 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 MACROD1Q9BQ69 325 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 NUAK2Q9H093 628 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 FBRSL1Q9HCM7 1045 aaKnown RBP5.41□□□□□ -1.54
LINC00397-202ENST00000606785 PDE7BQ9NP56 450 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 BABAM1Q9NWV8 329 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 LRIT1Q9P2V4 623 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 MORF4L1Q9UBU8 362 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 ZNF711Q9Y462 761 aa5.41□□□□□ -1.54
LINC00397-202ENST00000606785 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 ARHGAP10A1A4S6 786 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 TSPY2A6NKD2 308 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 LRRC53A6NM62 1247 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 A8MZ25 164 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 EIF3CLB5ME19 914 aaKnown RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 KCNJ18B7U540 433 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 BTBD19C9JJ37 291 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 K7ESM1 405 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SH2B2O14492 632 aaPredicted RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 LIASO43766 372 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SEC31AO94979 1220 aaKnown RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 OR2C1O95371 312 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SERPINC1P01008 464 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 APOA4P06727 396 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 TSPY3P0CV98 308 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 TSPY8P0CW00 308 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 CYP2D6P10635 497 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 FCGR2AP12318 317 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 GLULP15104 373 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 MCM3P25205 808 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 POU1F1P28069 291 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 IDUAP35475 653 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 CDH8P55286 799 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 TSPY1Q01534 308 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 KRTAP1-1Q07627 177 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 NIPAL4Q0D2K0 466 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 CSTF3Q12996 717 aaKnown RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SLC14A1Q13336 389 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 KPNB1Q14974 876 aaKnown RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 RPE65Q16518 533 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 GLIPR1L2Q4G1C9 344 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 RAB41Q5JT25 222 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SPDYAQ5MJ70 313 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SERTAD4-AS1Q5TG53 156 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 VWA5B1Q5TIE3 1220 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 DHRS13Q6UX07 377 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 FAM83HQ6ZRV2 1179 aaPredicted RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SLC29A4Q7RTT9 530 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 PAQR4Q8N4S7 273 aaPredicted RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 OR52N4Q8NGI2 321 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 P2RY11Q96G91 374 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 COQ10AQ96MF6 247 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 GATA5Q9BWX5 397 aaPredicted RBP5.4□□□□□ -1.54
LINC00397-202ENST00000606785 POLR1BQ9H9Y6 1135 aa5.4□□□□□ -1.54
LINC00397-202ENST00000606785 SLC2A4RGQ9NR83 387 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms