RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 HSD17B14Q9BPX1 270 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 SPATA5L1Q9BVQ7 753 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 GRPEL1Q9HAV7 217 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 ENTPD7Q9NQZ7 604 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 SPG21Q9NZD8 308 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CHMP5Q9NZZ3 219 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 DDX25Q9UHL0 483 aaKnown RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 TRHDEQ9UKU6 1024 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 GINS2Q9Y248 185 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 SRPRBQ9Y5M8 271 aaKnown RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 USP34Q70CQ2 3546 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 PRR23AA6NEV1 266 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 HIDE1A8MVS5 230 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 C2CD4DB7Z1M9 353 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 MAGEB2O15479 319 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 NEMFO60524 1076 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 AGFG2O95081 481 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 C22orf31O95567 290 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 MT-CO1P00395 513 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CLCN5P51795 746 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 ELLP55199 621 aaPredicted RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 SATB1Q01826 763 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 SMC1AQ14683 1233 aaKnown RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 FLYWCH1Q4VC44 716 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 MIS18BP1Q6P0N0 1132 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 FAM173BQ6P4H8 233 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 ZSCAN30Q86W11 494 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 PLA2G4DQ86XP0 818 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CCDC60Q8IWA6 550 aaPredicted RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 COLGALT2Q8IYK4 626 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 LRRC43Q8N309 656 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CBARPQ8N350 705 aaPredicted RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 TMEM105Q8N8V8 129 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 MRPL43Q8N983 215 aaKnown RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 PPP1R9BQ96SB3 815 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 APOL5Q9BWW9 433 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 KLK15Q9H2R5 256 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 POMKQ9H5K3 350 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 ZNF302Q9NR11 478 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 SEMA4GQ9NTN9 838 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 ASB6Q9NWX5 421 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 FBXO2Q9UK22 296 aaPredicted RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 NOL7Q9UMY1 257 aaKnown RBP5.23□□□□□ -1.57
KARSP3-201ENST00000571212 CLIC4Q9Y696 253 aa5.23□□□□□ -1.57
KARSP3-201ENST00000571212 EP300Q09472 2414 aaPredicted RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 C2orf16Q68DN1 1984 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 TRGV11A0A075B6L2 103 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 VPS37CA5D8V6 355 aaPredicted RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 DDX39AO00148 427 aaKnown RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 TULP2O00295 520 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 NDUFS2O75306 463 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 SLITRK3O94933 977 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 VTNP04004 478 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 OR52Z1P0C646 297 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 C5AR1P21730 350 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 SP100P23497 879 aaPredicted RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 TMOD1P28289 359 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 SFNP31947 248 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 CCDC173Q0VFZ6 552 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 IL10RAQ13651 578 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 GIT2Q14161 759 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 ACAP2Q15057 778 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 INAVAQ3KP66 663 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 ATAT1Q5SQI0 421 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 SWSAP1Q6NVH7 229 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 ECHDC2Q86YB7 292 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 SLC39A11Q8N1S5 342 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 METTL13Q8N6R0 699 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 TDRD5Q8NAT2 981 aaKnown RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 RSPH1Q8WYR4 309 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 TMEM125Q96AQ2 219 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 AK8Q96MA6 479 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 SMAD5Q99717 465 aaKnown RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 ZNF577Q9BSK1 485 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 MMTAG2Q9BU76 263 aaKnown RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 MRPL9Q9BYD2 267 aaKnown RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 CCSER1Q9C0I3 900 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 TTC12Q9H892 705 aaPredicted RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 TDP1Q9NUW8 608 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 DDX56Q9NY93 547 aaKnown RBP5.22□□□□□ -1.57
KARSP3-201ENST00000571212 CFAP45Q9UL16 551 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 SLC45A2Q9UMX9 530 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 PCDHA12Q9UN75 941 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 CDYLQ9Y232 598 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 HPSEQ9Y251 543 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 ATP6V1DQ9Y5K8 247 aa5.22□□□□□ -1.57
KARSP3-201ENST00000571212 FANCMQ8IYD8 2048 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 MTCL1Q9Y4B5 1905 aaKnown RBP5.21□□□□□ -1.58
KARSP3-201ENST00000571212 CACNA1AO00555 2505 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 DOCK8Q8NF50 2099 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 A0A0U1RQF3 1178 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 GABRDO14764 452 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 ZNF500O60304 480 aaPredicted RBP5.21□□□□□ -1.58
KARSP3-201ENST00000571212 PCDHGA12O60330 932 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 CXCL14O95715 111 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 GATA3P23771 443 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 RPA1P27694 616 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 LONP1P36776 959 aaKnown RBP5.21□□□□□ -1.58
KARSP3-201ENST00000571212 PBX3P40426 434 aa5.21□□□□□ -1.58
KARSP3-201ENST00000571212 ALDH7A1P49419 539 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms