RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ZNF135P52742 658 aaPredicted RBP16.05■□□□□ 0.16
USB1-208ENST00000563207 BOLA3Q53S33 107 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 EFHC2Q5JST6 749 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 PRAMEF14Q5SWL7 426 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 ERMARDQ5T6L9 678 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 ZNF776Q68DI1 518 aaPredicted RBP16.05■□□□□ 0.16
USB1-208ENST00000563207 KIAA1328Q86T90 577 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 CCAR2Q8N163 923 aaKnown RBP16.05■□□□□ 0.16
USB1-208ENST00000563207 STK40Q8N2I9 435 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 PTPRN2Q92932 1015 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 BTBD1Q9H0C5 482 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 SIK2Q9H0K1 926 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 NEUROG2Q9H2A3 272 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 PABPC3Q9H361 631 aaKnown RBP16.05■□□□□ 0.16
USB1-208ENST00000563207 OSGEPQ9NPF4 335 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 TMPRSS4Q9NRS4 437 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 TM7SF3Q9NS93 570 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 OR12D3Q9UGF7 316 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 FZD10Q9ULW2 581 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 PLXNB3Q9ULL4 1909 aa16.05■□□□□ 0.16
USB1-208ENST00000563207 IGLV3-10A0A075B6K4 115 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 MIPP30301 263 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 L1CAMP32004 1257 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 NOP2P46087 812 aaKnown RBP16.04■□□□□ 0.16
USB1-208ENST00000563207 OXCT1P55809 520 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 ST8SIA6P61647 398 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 ECT2LQ008S8 904 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 KIF5AQ12840 1032 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 E2F5Q15329 346 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 CST6Q15828 149 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 HADHQ16836 314 aaKnown RBP16.04■□□□□ 0.16
USB1-208ENST00000563207 CXorf57Q6NSI4 855 aaKnown RBP16.04■□□□□ 0.16
USB1-208ENST00000563207 FBXL22Q6P050 247 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 MARCH9Q86YJ5 346 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 AADATQ8N5Z0 425 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 ARFGAP1Q8N6T3 406 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 CCDC185Q8N715 623 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 GANCQ8TET4 914 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 SETD7Q8WTS6 366 aaKnown RBP16.04■□□□□ 0.16
USB1-208ENST00000563207 FBXL12Q9NXK8 326 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 KIAA1522Q9P206 1035 aaPredicted RBP16.04■□□□□ 0.16
USB1-208ENST00000563207 PPARGC1AQ9UBK2 798 aaKnown RBP16.04■□□□□ 0.16
USB1-208ENST00000563207 PCOLCE2Q9UKZ9 415 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 VANGL2Q9ULK5 521 aa16.04■□□□□ 0.16
USB1-208ENST00000563207 REXO2Q9Y3B8 237 aaKnown RBP16.04■□□□□ 0.16
USB1-208ENST00000563207 DOCK9Q9BZ29 2069 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 A0A1B0GVM2 712 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 TCAF2A6NFQ2 919 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 DRGXA6NNA5 263 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 CLDN11O75508 207 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 PTMAP06454 111 aaKnown RBP16.03■□□□□ 0.16
USB1-208ENST00000563207 FTH1P19P0C7X4 201 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 SLC1A1P43005 524 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 PSMD8P48556 350 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 CCZ1BP86790 482 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 CCZ1P86791 482 aaPredicted RBP16.03■□□□□ 0.16
USB1-208ENST00000563207 IL9RQ01113 521 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 CCDC173Q0VFZ6 552 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 SLC14A1Q13336 389 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 IFI16Q16666 785 aaKnown RBP16.03■□□□□ 0.16
USB1-208ENST00000563207 RAB6CQ53S08 254 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 NCEH1Q6PIU2 408 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 RAB44Q7Z6P3 723 aaPredicted RBP16.03■□□□□ 0.16
USB1-208ENST00000563207 KDF1Q8NAX2 398 aaPredicted RBP16.03■□□□□ 0.16
USB1-208ENST00000563207 ACRBPQ8NEB7 543 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 TEKT4Q8WW24 435 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 ALG14Q96F25 216 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 BTBD6Q96KE9 485 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 RPRD1AQ96P16 312 aaPredicted RBP16.03■□□□□ 0.16
USB1-208ENST00000563207 PPP1R9BQ96SB3 815 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 EPAS1Q99814 870 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 RAB6CQ9H0N0 254 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 ANKRD6Q9Y2G4 727 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 NEUROG3Q9Y4Z2 214 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 ADGRG1Q9Y653 693 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 PTPRBP23467 1997 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 IGF2RP11717 2491 aa16.03■□□□□ 0.16
USB1-208ENST00000563207 E9PAM4 449 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 H0Y8X5 98 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 RNASEH2AO75792 299 aaKnown RBP16.02■□□□□ 0.16
USB1-208ENST00000563207 ASLP04424 464 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 WNT1P04628 370 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 CD27P26842 260 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 SLC8A1P32418 973 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 AFF3P51826 1226 aaKnown RBP16.02■□□□□ 0.16
USB1-208ENST00000563207 CDH4P55283 916 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 ZBTB16Q05516 673 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 SLC12A1Q13621 1099 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 MESDQ14696 234 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 KIAA0895LQ68EN5 471 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 ZNF683Q8IZ20 524 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 SLC6A18Q96N87 628 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 TSGA10Q9BZW7 698 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 ZDHHC5Q9C0B5 715 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 PCED1AQ9H1Q7 454 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 TOR4AQ9NXH8 423 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 PCSK1NQ9UHG2 260 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 SARDHQ9UL12 918 aa16.02■□□□□ 0.16
USB1-208ENST00000563207 AP4E1Q9UPM8 1137 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms