RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 MST1RQ04912 1400 aa5.54□□□□□ -1.52
SYNE2-210ENST00000553455 WDR33Q9C0J8 1336 aaKnown RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 TRBV5-7A0A0A0MS05 114 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 TACC1O75410 805 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 MLYCDO95822 493 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 SCGB1D1O95968 90 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 ARL1P40616 181 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 BLKP51451 505 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 SETQ01105 290 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 SLC10A2Q12908 348 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 FOXF2Q12947 444 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 FOXD4Q12950 439 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 DCTN2Q13561 401 aaKnown RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 CEP78Q5JTW2 689 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 STRIP1Q5VSL9 837 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 MOB3CQ70IA8 216 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 CYB5R4Q7L1T6 521 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 PRSS45Q7RTY3 260 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 UBE2Q1Q7Z7E8 422 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 CPLX4Q7Z7G2 160 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 WDR5BQ86VZ2 330 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 CCDC25Q86WR0 208 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 NME8Q8N427 588 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 GALNT16Q8N428 558 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 DNAAF1Q8NEP3 725 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 KLHL29Q96CT2 875 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 PERPQ96FX8 193 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 PIP5K1AQ99755 562 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 SH2D3AQ9BRG2 576 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 ITPAQ9BY32 194 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 TMX4Q9H1E5 349 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 PDCL3Q9H2J4 239 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 RANBP17Q9H2T7 1088 aaKnown RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 RIOX1Q9H6W3 641 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 ACTR5Q9H9F9 607 aaPredicted RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 ENTPD7Q9NQZ7 604 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 C20orf141Q9NUB4 165 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 LAMP3Q9UQV4 416 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 PSAT1Q9Y617 370 aa5.53□□□□□ -1.52
SYNE2-210ENST00000553455 SETD1BQ9UPS6 1966 aaKnown RBP5.53□□□□□ -1.52
SYNE2-210ENST00000553455 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-210ENST00000553455 FSD2A1L4K1 749 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 CBY3A6NI87 242 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 FOXO6A8MYZ6 492 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 IFNL4K9M1U5 179 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 DOK2O60496 412 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 ZBED4O75132 1171 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 PTP4A3O75365 173 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 NUDT3O95989 172 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 GALTP07902 379 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 CD63P08962 238 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 LAMP2P13473 410 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 PSMA4P25789 261 aaKnown RBP5.52□□□□□ -1.53
SYNE2-210ENST00000553455 KLRC2P26717 231 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 ARSFP54793 590 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 RPS3AP61247 264 aaKnown RBP5.52□□□□□ -1.53
SYNE2-210ENST00000553455 SYTL3Q4VX76 610 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 SPATA1Q5VX52 437 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 TMEM268Q5VZI3 342 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 FAM205BPQ63HN1 556 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 ITPRIPL1Q6GPH6 555 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 IL20RBQ6UXL0 311 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 FAM57BQ71RH2 274 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 FASTKD5Q7L8L6 764 aaKnown RBP5.52□□□□□ -1.53
SYNE2-210ENST00000553455 RRM2BQ7LG56 351 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 PTF1AQ7RTS3 328 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 RD3Q7Z3Z2 195 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 FAM160B2Q86V87 743 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 DDIASQ8IXT1 998 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 ADGRF4Q8IZF3 695 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 ADSSL1Q8N142 457 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 ETNPPLQ8TBG4 499 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 SAAL1Q96ER3 474 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 CLMNQ96JQ2 1002 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 GLIS2Q9BZE0 524 aaPredicted RBP5.52□□□□□ -1.53
SYNE2-210ENST00000553455 SPAG4Q9NPE6 437 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 SNTG1Q9NSN8 517 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 KIAA1456Q9P272 454 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 UTS2RQ9UKP6 389 aa5.52□□□□□ -1.53
SYNE2-210ENST00000553455 ADGRF5Q8IZF2 1346 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-210ENST00000553455 ANKRD18BA2A2Z9 1011 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 A6NCN8 305 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 RHODO00212 210 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 TP73O15350 636 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 AKAP8O43823 692 aaKnown RBP5.51□□□□□ -1.53
SYNE2-210ENST00000553455 UGDHO60701 494 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 GFPT2O94808 682 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 TUBB4AP04350 444 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 HSPA1AP0DMV8 641 aaKnown RBP5.51□□□□□ -1.53
SYNE2-210ENST00000553455 HSPA1BP0DMV9 641 aaKnown RBP5.51□□□□□ -1.53
SYNE2-210ENST00000553455 EDN2P20800 178 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 BMP5P22003 454 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 ATP5F1P24539 256 aaPredicted RBP5.51□□□□□ -1.53
SYNE2-210ENST00000553455 DRG2P55039 364 aaKnown RBP5.51□□□□□ -1.53
SYNE2-210ENST00000553455 CYP4A11Q02928 519 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 PMPCAQ10713 525 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 STIM1Q13586 685 aa5.51□□□□□ -1.53
SYNE2-210ENST00000553455 EIF4A2Q14240 407 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms