RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 KALRNO60229 2985 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 IGLV3-10A0A075B6K4 115 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 LY6G6EA0A0G2JKS1 128 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 POM121BA6NF01 834 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 PRAMEF26H0Y7S4 382 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 CASC3O15234 703 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 FFAR2O15552 330 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 LEFTY1O75610 366 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 MMEP08473 750 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 C1SP09871 688 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 CKMT2P17540 419 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 DGKAP23743 735 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 ACVRL1P37023 503 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 KLK7P49862 253 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 ARF5P84085 180 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 RAPGEF1Q13905 1077 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 SLC25A52Q3SY17 297 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 VWA3BQ502W6 1294 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 SETMARQ53H47 684 aaPredicted RBP11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 SLC45A4Q5BKX6 768 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 BRMS1LQ5PSV4 323 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 TPRG1LQ5T0D9 272 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 KLHDC7AQ5VTJ3 777 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 C22orf39Q6P5X5 142 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 GCNT7Q6ZNI0 430 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 BNIPLQ7Z465 357 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 IQCHQ86VS3 1027 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 FAM131BQ86XD5 332 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 EMC1Q8N766 993 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 NETO2Q8NC67 525 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 TMIEQ8NEW7 156 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 SLC20A1Q8WUM9 679 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 C18orf8Q96DM3 657 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 PGAP3Q96FM1 320 aaPredicted RBP11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 FAM81BQ96LP2 452 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 SPON2Q9BUD6 331 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 NAA15Q9BXJ9 866 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 PREBQ9HCU5 417 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 SAMSN1Q9NSI8 373 aaKnown RBP11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 TMEM59LQ9UK28 342 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 AK5Q9Y6K8 562 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 U3KQA8 63 aa11.81□□□□□ -0.52
PRPF40B-212ENST00000551111 LRP4O75096 1905 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 FAM72CH0Y354 149 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 YKT6O15498 198 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 NEBLO76041 1014 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 PCDH8O95206 1070 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 PRKCSHP14314 528 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 ACP1P24666 158 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 OR1E1P30953 314 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 UBE2HP62256 183 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 KRT83P78385 493 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 ATP11AP98196 1134 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 RTP5Q14D33 572 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 C15orf59Q2T9L4 293 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 TMEM259Q4ZIN3 620 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 FAM72AQ5TYM5 149 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 NAA35Q5VZE5 725 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 FAM72DQ6L9T8 149 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 LEKR1Q6ZMV7 388 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 ERN2Q76MJ5 926 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 TMC6Q7Z403 805 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 HORMAD1Q86X24 394 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 ERICH1Q86X53 443 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 FAM72BQ86X60 149 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 DRC7Q8IY82 874 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 DCAF4L2Q8NA75 395 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 MLKLQ8NB16 471 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 TMEM35BQ8NCS4 154 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 C1orf74Q96LT6 269 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 TUBGCP2Q9BSJ2 902 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 C2orf49Q9BVC5 232 aaPredicted RBP11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 CALN1Q9BXU9 219 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 KLHL11Q9NVR0 708 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 KLF15Q9UIH9 416 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 GGT7Q9UJ14 662 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 FCF1Q9Y324 198 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 PCDHB1Q9Y5F3 818 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 UNC13CQ8NB66 2214 aa11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 HELZ2Q9BYK8 2649 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-212ENST00000551111 ARHGEF17Q96PE2 2063 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 BRINP1O60477 761 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 PIAS2O75928 621 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 PAK4O96013 591 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 CHRNB2P17787 502 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 HNF1BP35680 557 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 DNA2P51530 1060 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 NOMO3P69849 1222 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 OVGP1Q12889 678 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 ZNF211Q13398 564 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 TPD52L1Q16890 204 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 C6orf118Q5T5N4 469 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 Q6ZSR6 202 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 ABI3BPQ7Z7G0 1075 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 SETD3Q86TU7 594 aaPredicted RBP11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 ZDHHC17Q8IUH5 632 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 OXR1Q8N573 874 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 DCBLD1Q8N8Z6 715 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 OR6K2Q8NGY2 324 aa11.79□□□□□ -0.52
PRPF40B-212ENST00000551111 OR4C6Q8NH72 309 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms