RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 PEPDP12955 493 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 SLC5A1P13866 664 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 MCM3P25205 808 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 MST1P26927 711 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 FMO4P31512 558 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 GRK5P34947 590 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 RPL3P39023 403 aaKnown RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 IL15P40933 162 aaPredicted RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 LUMP51884 338 aaPredicted RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 FOXL2P58012 376 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 RPL15P61313 204 aaKnown RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 ADORA2A-AS1P86434 159 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ECT2LQ008S8 904 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 GAGE1Q13065 139 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 GAGE4Q13068 117 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ZBTB17Q13105 803 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 PKP1Q13835 747 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ZNF239Q16600 458 aaKnown RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 KIAA0753Q2KHM9 967 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 C5orf22Q49AR2 442 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ZNF569Q5MCW4 686 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ANKRD40Q6AI12 368 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 DARS2Q6PI48 645 aaKnown RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 SLC30A9Q6PML9 568 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 PATL1Q86TB9 770 aaKnown RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 SFR1Q86XK3 245 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 RASGRP3Q8IV61 690 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 CIARTQ8N365 385 aaPredicted RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 SRBD1Q8N5C6 995 aaKnown RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 METTL27Q8N6F8 245 aaPredicted RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 ZNF441Q8N8Z8 693 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ATP11CQ8NB49 1132 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ADAD2Q8NCV1 583 aaKnown RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 DMBX1Q8NFW5 382 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 PJA1Q8NG27 643 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 RFWD2Q8NHY2 731 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 LNX1Q8TBB1 728 aaPredicted RBP0.88□□□□□ -2.27
COPB1-212ENST00000534771 HCAR2Q8TDS4 363 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 IQCDQ96DY2 449 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ATOH8Q96SQ7 321 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 XRN2Q9H0D6 950 aaKnown RBP eCLIP0.88□□□□□ -2.27
COPB1-212ENST00000534771 PCDHAC1Q9H158 963 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 FAM204AQ9H8W3 233 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 KCNK9Q9NPC2 374 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ARL15Q9NXU5 204 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 VDAC3Q9Y277 283 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 ZBTB1Q9Y2K1 713 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 KCNK7Q9Y2U2 307 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 PAM16Q9Y3D7 125 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 SNX9Q9Y5X1 595 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 CGNL1Q0VF96 1302 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D3DA0A087WVF3 549 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D3IA0A087WXS9 549 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D3EA0A087X179 549 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D3KA0A087X1G2 549 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 LOC105369274A0A096LPK9 316 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 LOC102723532A0A0G2JNH3 316 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP0.87□□□□□ -2.27
COPB1-212ENST00000534771 GXYLT2A0PJZ3 443 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D3BA6NDS4 549 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TMEM247A6NEH6 219 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D3FA6NER0 549 aaPredicted RBP0.87□□□□□ -2.27
COPB1-212ENST00000534771 LILRA5A6NI73 299 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 MBD3L5A6NJ08 208 aaPredicted RBP0.87□□□□□ -2.27
COPB1-212ENST00000534771 CLCA1A8K7I4 914 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 KRTAP16-1A8MUX0 517 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D3LB9A6J9 549 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 J3KTA2 159 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 M0QYT0 321 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 CHL1O00533 1208 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TAF5LO75529 589 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TIPRLO75663 272 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 KDM4BO94953 1096 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 CLDN14O95500 239 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TUBBP07437 444 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 ITGA5P08648 1049 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TBC1D3HP0C7X1 549 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 DHRS4L1P0CG22 281 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 U2AF1L5P0DN76 240 aaPredicted RBP0.87□□□□□ -2.27
COPB1-212ENST00000534771 FCGR2AP12318 317 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 CKMT1AP12532 417 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 PECAM1P16284 738 aaPredicted RBP0.87□□□□□ -2.27
COPB1-212ENST00000534771 PRKCHP24723 683 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 MARK3P27448 753 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 SSTR2P30874 369 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 PIK3CBP42338 1070 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 CLCNKBP51801 687 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 FUT6P51993 359 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 OAZ1P54368 228 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TAS2R50P59544 299 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 TUBB4BP68371 445 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 IRX1P78414 480 aaPredicted RBP0.87□□□□□ -2.27
COPB1-212ENST00000534771 U2AF1Q01081 240 aaKnown RBP eCLIP0.87□□□□□ -2.27
COPB1-212ENST00000534771 ZNF155Q12901 538 aaPredicted RBP0.87□□□□□ -2.27
COPB1-212ENST00000534771 PIN1Q13526 163 aaPredicted RBP0.87□□□□□ -2.27
COPB1-212ENST00000534771 SLC5A9Q2M3M2 681 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 ZACNQ401N2 412 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 ZNF876PQ49A33 203 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 MINDY4Q4G0A6 757 aa0.87□□□□□ -2.27
COPB1-212ENST00000534771 SYTL3Q4VX76 610 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms