RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 DHRS4L1P0CG22 281 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 CNTFP26441 200 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 CORO1AP31146 461 aaKnown RBP17.13■□□□□ 0.33
SREK1-212ENST00000522912 NUMBP49757 651 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 IL10RBQ08334 325 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 IHHQ14623 411 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 SEPT7Q16181 437 aaKnown RBP17.13■□□□□ 0.33
SREK1-212ENST00000522912 CGB2Q6NT52 195 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 RANBP10Q6VN20 620 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 MICALCLQ6ZW33 695 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 IMP4Q96G21 291 aaKnown RBP17.13■□□□□ 0.33
SREK1-212ENST00000522912 CABS1Q96KC9 395 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 PPP1R2P1Q96PQ5 205 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 FAM111AQ96PZ2 611 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 SRPK1Q96SB4 655 aaKnown RBP17.13■□□□□ 0.33
SREK1-212ENST00000522912 KIFC1Q9BW19 673 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 RXFP1Q9HBX9 757 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 ZFATQ9P243 1243 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 RRP15Q9Y3B9 282 aaKnown RBP17.13■□□□□ 0.33
SREK1-212ENST00000522912 PCDHB12Q9Y5F1 795 aa17.13■□□□□ 0.33
SREK1-212ENST00000522912 H3BNC9 293 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 COPEO14579 308 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 IRF1P10914 325 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 SGSHP51688 502 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 EPHB3P54753 998 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 RPS24P62847 133 aaKnown RBP17.12■□□□□ 0.33
SREK1-212ENST00000522912 TNK2Q07912 1038 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 DNAJC3Q13217 504 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 FAM47EQ6ZV65 393 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 KDELC2Q7Z4H8 507 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 SRLQ86TD4 932 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 PGBD5Q8N414 524 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 OR52K2Q8NGK3 314 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 ZNF75CPQ92670 426 aaPredicted RBP17.12■□□□□ 0.33
SREK1-212ENST00000522912 AZIN2Q96A70 460 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 PRICKLE1Q96MT3 831 aaPredicted RBP17.12■□□□□ 0.33
SREK1-212ENST00000522912 TMEM106CQ9BVX2 250 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 ATXN3LQ9H3M9 355 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
SREK1-212ENST00000522912 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.12■□□□□ 0.33
SREK1-212ENST00000522912 LAMA2P24043 3122 aaKnown RBP17.12■□□□□ 0.33
SREK1-212ENST00000522912 DENND4CQ5VZ89 1909 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 TTC24A2A3L6 582 aaPredicted RBP17.11■□□□□ 0.33
SREK1-212ENST00000522912 WDR91A4D1P6 747 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 F11P03951 625 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 MMP2P08253 660 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 CNPP09543 421 aaKnown RBP17.11■□□□□ 0.33
SREK1-212ENST00000522912 ALADP13716 330 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 WNT3AP56704 352 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 HTRA4P83105 476 aaPredicted RBP17.11■□□□□ 0.33
SREK1-212ENST00000522912 ITKQ08881 620 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 MPP3Q13368 585 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 TEDDM1Q5T9Z0 273 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 GPR65Q8IYL9 337 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 LRRC8CQ8TDW0 803 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 AGAP2Q99490 1192 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 AGO1Q9UL18 857 aaKnown RBP17.11■□□□□ 0.33
SREK1-212ENST00000522912 ALPK3Q96L96 1907 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 A0A0D9SEW6 157 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 CCDC78A2IDD5 438 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 PRAMEF11O60813 436 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 F7P08709 466 aaPredicted RBP17.11■□□□□ 0.33
SREK1-212ENST00000522912 CTSAP10619 480 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 ETFBP38117 255 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 CHRNA4P43681 627 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 PPP3CCP48454 512 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 DSC2Q02487 901 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 POU6F1Q14863 301 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 PCSK7Q16549 785 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 HSP90AA5PQ58FG0 334 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 PCID2Q5JVF3 399 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 PKN3Q6P5Z2 889 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 FIBCD1Q8N539 461 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
SREK1-212ENST00000522912 SLC22A12Q96S37 553 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 CPNE1Q99829 537 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 FSD1LQ9BXM9 530 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 SLC13A1Q9BZW2 595 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 VPS11Q9H270 941 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 IL21Q9HBE4 155 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 SLCO1B3Q9NPD5 702 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 PCMTD2Q9NV79 361 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 MKS1Q9NXB0 559 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 UXTQ9UBK9 157 aaPredicted RBP17.11■□□□□ 0.33
SREK1-212ENST00000522912 PLLPQ9Y342 182 aa17.11■□□□□ 0.33
SREK1-212ENST00000522912 ATXN2Q99700 1313 aaKnown RBP17.1■□□□□ 0.33
SREK1-212ENST00000522912 FGBP02675 491 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 ALDOAP04075 364 aaKnown RBP17.1■□□□□ 0.33
SREK1-212ENST00000522912 ITGA2BP08514 1039 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 CA8P35219 290 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 GP5P40197 560 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 CD86P42081 329 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 CDH4P55283 916 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 ITIH4Q14624 930 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 LBRQ14739 615 aaKnown RBP17.1■□□□□ 0.33
SREK1-212ENST00000522912 KCNMB4Q86W47 210 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 NDUFAF2Q8N183 169 aa17.1■□□□□ 0.33
SREK1-212ENST00000522912 OR7D4Q8NG98 312 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms