RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PATJQ8NI35 1801 aa18.65■□□□□ 0.58
SDC2-202ENST00000518385 OR6C75A6NL08 312 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 CASQ2O14958 399 aaPredicted RBP18.64■□□□□ 0.58
SDC2-202ENST00000518385 MLNP12872 115 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 ALOX15P16050 662 aaPredicted RBP18.64■□□□□ 0.58
SDC2-202ENST00000518385 MAGEA11P43364 429 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 AQP5P55064 265 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 GAD2Q05329 585 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 SMARCB1Q12824 385 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 ELAVL2Q12926 359 aaKnown RBP18.64■□□□□ 0.58
SDC2-202ENST00000518385 CDC16Q13042 620 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 BRMS1LQ5PSV4 323 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 ALYREFQ86V81 257 aaKnown RBP18.64■□□□□ 0.58
SDC2-202ENST00000518385 PDSS2Q86YH6 399 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 TREML1Q86YW5 311 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 IGDCC3Q8IVU1 814 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 CTAGE3PQ8IX95 158 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 OR6Y1Q8NGX8 325 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 BADQ92934 168 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 C8orf48Q96LL4 319 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 EPAS1Q99814 870 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 THTPAQ9BU02 230 aa18.64■□□□□ 0.58
SDC2-202ENST00000518385 A0A0A0MRY4 1105 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 TNFRSF10BO14763 440 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 DCLK1O15075 740 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 MTSS1O43312 755 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 BUD23O43709 281 aaKnown RBP18.64■□□□□ 0.57
SDC2-202ENST00000518385 OPHN1O60890 802 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 PENKP01210 267 aaPredicted RBP18.64■□□□□ 0.57
SDC2-202ENST00000518385 FGBP02675 491 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 GRIK1P39086 918 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 POLE2P56282 527 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 FPGSQ05932 587 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 MED21Q13503 144 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 SEMA5AQ13591 1074 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 TTC7BQ86TV6 843 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 CATSPER1Q8NEC5 780 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 PIWIL2Q8TC59 973 aaKnown RBP18.64■□□□□ 0.57
SDC2-202ENST00000518385 ACTRT2Q8TDY3 377 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 SPATA13Q96N96 652 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 NAT9Q9BTE0 207 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 KLHL4Q9C0H6 718 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 Q9H521 79 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 RC3H2Q9HBD1 1191 aaKnown RBP18.64■□□□□ 0.57
SDC2-202ENST00000518385 PLK2Q9NYY3 685 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 DCDC2Q9UHG0 476 aa18.64■□□□□ 0.57
SDC2-202ENST00000518385 NLRC5Q86WI3 1866 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 COL4A6Q14031 1691 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 SYNJ2BP-COX16A0A087WUM0 186 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 CREB3O43889 395 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 IGLV3-25P01717 112 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 UQCRBP14927 111 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 MX2P20592 715 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 GSTT1P30711 240 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 CPOXP36551 454 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 HK2P52789 917 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 COPAP53621 1224 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 TPI1P60174 286 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 EIF4EBP2Q13542 120 aaPredicted RBP18.63■□□□□ 0.57
SDC2-202ENST00000518385 MRPL58Q14197 206 aaKnown RBP18.63■□□□□ 0.57
SDC2-202ENST00000518385 MAP7Q14244 749 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 FSCBQ5H9T9 825 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 SH2D4BQ5SQS7 431 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 RASIP1Q5U651 963 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 STEAP4Q687X5 459 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 PGM2L1Q6PCE3 622 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 OTOP2Q7RTS6 562 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 KBTBD2Q8IY47 623 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 C7orf61Q8IZ16 206 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 PPP4R1Q8TF05 950 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 LZICQ8WZA0 190 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 CFAP36Q96G28 342 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 RILPQ96NA2 401 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 TMEM209Q96SK2 561 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 EBNA1BP2Q99848 306 aaKnown RBP18.63■□□□□ 0.57
SDC2-202ENST00000518385 GPR62Q9BZJ7 368 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 FBXO44Q9H4M3 255 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 SUDS3Q9H7L9 328 aaPredicted RBP18.63■□□□□ 0.57
SDC2-202ENST00000518385 ALG13Q9NP73 1137 aaKnown RBP18.63■□□□□ 0.57
SDC2-202ENST00000518385 EIF2B3Q9NR50 452 aaKnown RBP18.63■□□□□ 0.57
SDC2-202ENST00000518385 COX16Q9P0S2 106 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 PCDH10Q9P2E7 1040 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 PCDHA11Q9Y5I1 949 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 WASF2Q9Y6W5 498 aa18.63■□□□□ 0.57
SDC2-202ENST00000518385 NT5C1B-RDH14C9J2C7 533 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 ATP9BO43861 1147 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 FGFR3P22607 806 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 SERPINB6P35237 376 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 ALDH7A1P49419 539 aaKnown RBP18.62■□□□□ 0.57
SDC2-202ENST00000518385 ZNF33AQ06730 810 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 METTL21CQ5VZV1 264 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 BTBD8Q5XKL5 378 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 TMCO2Q7Z6W1 182 aaPredicted RBP18.62■□□□□ 0.57
SDC2-202ENST00000518385 EGFL6Q8IUX8 553 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 CMTR2Q8IYT2 770 aaKnown RBP18.62■□□□□ 0.57
SDC2-202ENST00000518385 PPP1R14CQ8TAE6 165 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 DQX1Q8TE96 717 aaKnown RBP18.62■□□□□ 0.57
SDC2-202ENST00000518385 CDKL2Q92772 493 aa18.62■□□□□ 0.57
SDC2-202ENST00000518385 PRR11Q96HE9 360 aaPredicted RBP18.62■□□□□ 0.57
SDC2-202ENST00000518385 RHOBTB2Q9BYZ6 727 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms