RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 FAM228BP0C875 321 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 CSRP1P21291 193 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 GRIA4P48058 902 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 BOLA3Q53S33 107 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 PPM1JQ5JR12 505 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 VSTM4Q8IW00 320 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 RNF214Q8ND24 703 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 C1orf216Q8TAB5 229 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 DHX35Q9H5Z1 703 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 DNAAF2Q9NVR5 837 aaKnown RBP21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 ARHGAP20Q9P2F6 1191 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 IL36AQ9UHA7 158 aa21.76■■□□□ 1.07
UBE2D3-229ENST00000510129 A0A1W2PPC4 97 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 SSU72P8A0A1W2PR75 194 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 FAM47DPA6NHR8 397 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 EEF2KO00418 725 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 SMAD6O43541 496 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 PLRG1O43660 514 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 CER1O95813 267 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 GLDCP23378 1020 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 MIPP30301 263 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 DRD3P35462 400 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 ACVRL1P37023 503 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 HCAR3P49019 387 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 NDST2P52849 883 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 RACK1P63244 317 aaKnown RBP21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 ZNF252P-AS1Q0IIN9 211 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 INO80DQ53TQ3 878 aaPredicted RBP21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 CARD16Q5EG05 197 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 CCDC122Q5T0U0 273 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 ZNF354CQ86Y25 554 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 MINDY1Q8N5J2 469 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 HEPHQ9BQS7 1158 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 THAP2Q9H0W7 228 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 DEF6Q9H4E7 631 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 SLC32A1Q9H598 525 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 ZWILCHQ9H900 591 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 PREBQ9HCU5 417 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 NDFIP2Q9NV92 336 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 PCSK1NQ9UHG2 260 aa21.75■■□□□ 1.07
UBE2D3-229ENST00000510129 PI4KAP42356 2102 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 CHD5Q8TDI0 1954 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 PCDH15Q96QU1 1955 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3DA0A087WVF3 549 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3IA0A087WXS9 549 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3EA0A087X179 549 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3KA0A087X1G2 549 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3FA6NER0 549 aaPredicted RBP21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3LB9A6J9 549 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 KPNA3O00505 521 aaPredicted RBP21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 DAPK3O43293 454 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 LRCH4O75427 683 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 CYP1A2P05177 515 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 IGHV4-34P06331 123 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3HP0C7X1 549 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 SNRPD1P62314 119 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 GRIK2Q13002 908 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 HNRNPDQ14103 355 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 SLC18A3Q16572 532 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 UAP1L1Q3KQV9 507 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 SLC45A4Q5BKX6 768 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3GQ6DHY5 549 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3CQ6IPX1 549 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 NEK5Q6P3R8 708 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 CNGA4Q8IV77 575 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 TBC1D3Q8IZP1 549 aaPredicted RBP21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 NIPA2Q8N8Q9 360 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 SNRNP25Q9BV90 132 aaKnown RBP21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 MAGEB5Q9BZ81 275 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 SARDHQ9UL12 918 aa21.74■■□□□ 1.07
UBE2D3-229ENST00000510129 MYO1FO00160 1098 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 GSRP00390 522 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 ZNF883P0CG24 379 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 CEACAM1P13688 526 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 DNA2P51530 1060 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 CNTN1Q12860 1018 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 SARM1Q6SZW1 724 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 DPY19L3Q6ZPD9 716 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 ADAT2Q7Z6V5 191 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 PRPF39Q86UA1 669 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 TRIM69Q86WT6 500 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 DNAAF5Q86Y56 855 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 ARFGAP1Q8N6T3 406 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 NUP85Q9BW27 656 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 HDAC8Q9BY41 377 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 TNKS2Q9H2K2 1166 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 TM9SF3Q9HD45 589 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 UVRAGQ9P2Y5 699 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 DMTF1Q9Y222 760 aa21.73■■□□□ 1.07
UBE2D3-229ENST00000510129 C10orf142B7Z368 130 aa21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 RASA4BC9J798 803 aa21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 RASA4O43374 803 aa21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 LATO43561 262 aa21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 BUB1O43683 1085 aa21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 AKR1B10O60218 316 aa21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 DFNA5O60443 496 aa21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 EIF4A3P38919 411 aaKnown RBP21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 RAD51Q06609 339 aa21.72■■□□□ 1.07
UBE2D3-229ENST00000510129 SERINC3Q13530 473 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms