RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 FSIP1Q8NA03 581 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 OR6Y1Q8NGX8 325 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 HDAC7Q8WUI4 952 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 RUBCNQ92622 972 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 PHF21BQ96EK2 531 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 CTDSP1Q9GZU7 261 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 CHODLQ9H9P2 273 aa3.66□□□□□ -1.82
HMGB1P29-201ENST00000505659 NOTCH4Q99466 2003 aa3.65□□□□□ -1.82
HMGB1P29-201ENST00000505659 MST1RQ04912 1400 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 CLEC18AA5D8T8 446 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 SAC3D1A6NKF1 404 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 CBX6O95503 412 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 HOXC6P09630 235 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 HOXD3P31249 432 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 PNPLA4P41247 253 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 MTNR1AP48039 350 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 TRAPPC10P48553 1259 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 RPS6KA3P51812 740 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 MVDP53602 400 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 CDH12P55289 794 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 DSCR9P59020 149 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 THOC5Q13769 683 aaKnown RBP3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 KEAP1Q14145 624 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 MORC3Q14149 939 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 IL13RA2Q14627 380 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 FAM83BQ5T0W9 1011 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 C10orf62Q5T681 223 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 ATG9BQ674R7 924 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 FAM83HQ6ZRV2 1179 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 SERPINA11Q86U17 422 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 DCP1BQ8IZD4 617 aaKnown RBP3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 SAMD3Q8N6K7 520 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 MIGA1Q8NAN2 632 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 CLEC18CQ8NCF0 446 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 SMRP1Q8NCR6 262 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 BICD2Q8TD16 824 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 RBM17Q96I25 401 aaKnown RBP3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 LMLNQ96KR4 655 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 TMLHEQ9NVH6 421 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 NLKQ9UBE8 527 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 RIPOR2Q9Y4F9 1068 aa3.65□□□□□ -1.83
HMGB1P29-201ENST00000505659 B9A039 149 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 STX16-NPEPL1H3BU86 382 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 STX16O14662 325 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 CCNT1O60563 726 aaKnown RBP3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 TFRCP02786 760 aaKnown RBP3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 TGFB3P10600 412 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 GNLYP22749 145 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 RFC1P35251 1148 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 ADD2P35612 726 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 DPP6P42658 865 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 TRAF3Q13114 568 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 BYSLQ13895 437 aaKnown RBP3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 NFATC4Q14934 902 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 FBXO43Q4G163 708 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 FSCBQ5H9T9 825 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 SH2D4BQ5SQS7 431 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 TMEM268Q5VZI3 342 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 C18orf65Q6ZTR6 163 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 LMO3Q8TAP4 145 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 GPT2Q8TD30 523 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 ATOH1Q92858 354 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 LTV1Q96GA3 475 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 MEIS3Q99687 375 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 SEZ6LQ9BYH1 1024 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 SELENONQ9NZV5 590 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 SEL1LQ9UBV2 794 aa3.64□□□□□ -1.83
HMGB1P29-201ENST00000505659 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 TMEM247A6NEH6 219 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 PRSS44E7EML9 344 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 RNMTO43148 476 aaKnown RBP3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 STRNO43815 780 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 FAM155BO75949 473 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 FGF3P11487 239 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 CLCN5P51795 746 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 ARHGAP8P85298 464 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 PRKG1Q13976 671 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 SHBQ15464 509 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 TAF5Q15542 800 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 NADSYN1Q6IA69 706 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 CAPRIN2Q6IMN6 1127 aaKnown RBP3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 NAPEPLDQ6IQ20 393 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 AADACL2Q6P093 401 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 RINLQ6ZS11 566 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 MOGAT3Q86VF5 341 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 SETD9Q8NE22 299 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 SLC35F5Q8WV83 523 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 AFG1LQ8WV93 481 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 THAP4Q8WY91 577 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 TEFMQ96QE5 360 aaKnown RBP3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 TWSG1Q9GZX9 223 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 SAYSD1Q9NPB0 183 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 CD93Q9NPY3 652 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 WNT16Q9UBV4 365 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 DHDHQ9UQ10 334 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 CKAP5Q14008 2032 aa3.63□□□□□ -1.83
HMGB1P29-201ENST00000505659 C17orf102A2RUQ5 167 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 OR6C68A6NDL8 312 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 IFITM10A6NMD0 228 aa3.62□□□□□ -1.83
HMGB1P29-201ENST00000505659 VWA5AO00534 786 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms