RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 TCF15Q12870 199 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 STK4Q13043 487 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TRAF1Q13077 416 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 GPS1Q13098 491 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 MPP3Q13368 585 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 PTCHD3Q3KNS1 767 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 KIAA1755Q5JYT7 1200 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TREML2Q5T2D2 321 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 MSANTD2Q6P1R3 559 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 PRPF39Q86UA1 669 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 ZNF761Q86XN6 746 aaPredicted RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 WDTC1Q8N5D0 677 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 GPR150Q8NGU9 434 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 SMCR8Q8TEV9 937 aaPredicted RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 ZCCHC14Q8WYQ9 949 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CPT1BQ92523 772 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CNDP2Q96KP4 475 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TCEANC2Q96MN5 208 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 KLHL32Q96NJ5 620 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 NR1H4Q96RI1 486 aaPredicted RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 PACSIN1Q9BY11 444 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 LRRC2Q9BYS8 371 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 FTOQ9C0B1 505 aaKnown RBP eCLIP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 GRPEL1Q9HAV7 217 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 SEMA4BQ9NPR2 832 aaPredicted RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 RNF186Q9NXI6 227 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 EIF2B4Q9UI10 523 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 ADAMTS5Q9UNA0 930 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CLCA2Q9UQC9 943 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 KLF18A0A0U1RQI7 1052 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 GTPBP10A4D1E9 387 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CXorf49A8MYA2 514 aaPredicted RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TMEM232C9JQI7 657 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 KLRF2D3W0D1 207 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TNPO2O14787 897 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 VPS4BO75351 444 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 KNG1P01042 644 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 ZNF28P17035 718 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CIITAP33076 1130 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 KCNQ1P51787 676 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 OAZ1P54368 228 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 IKQ13123 557 aaPredicted RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TOB2Q14106 344 aaPredicted RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 IRF3Q14653 427 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 SEC23BQ15437 767 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 MED22Q15528 200 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 NFIL3Q16649 462 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TMEM266Q2M3C6 531 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 ANKS6Q68DC2 871 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 ZNF529Q6P280 563 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CPLX2Q6PUV4 134 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 LRRC8DQ7L1W4 858 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CXXC5Q7LFL8 322 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 WDR48Q8TAF3 677 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 ADAMTS17Q8TE56 1095 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 CUL5Q93034 780 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 WDR24Q96S15 920 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 MRPL9Q9BYD2 267 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 TTYH3Q9C0H2 523 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 STN1Q9H668 368 aaKnown RBP4.8□□□□□ -1.64
CFHR3-205ENST00000471440 PARD6AQ9NPB6 346 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 MAD2L2Q9UI95 211 aa4.8□□□□□ -1.64
CFHR3-205ENST00000471440 M0QYT0 321 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 VWA5AO00534 786 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 ATP2A1O14983 1001 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 TBX10O75333 385 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 PRSS23O95084 383 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 GYPEP15421 78 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 PIK3CAP42336 1068 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 METAP2P50579 478 aaKnown RBP eCLIP4.79□□□□□ -1.64
CFHR3-205ENST00000471440 CCNA1P78396 465 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 DUSP2Q05923 314 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 SF3A3Q12874 501 aaKnown RBP eCLIP4.79□□□□□ -1.64
CFHR3-205ENST00000471440 CHAF1BQ13112 559 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 ARHGEF6Q15052 776 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 NT5DC1Q5TFE4 455 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 CACHD1Q5VU97 1274 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 TRIM68Q6AZZ1 485 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 MCTP2Q6DN12 878 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 C17orf99Q6UX52 265 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 GPR149Q86SP6 731 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 FAM71DQ8N9W8 422 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 ZBTB8BQ8NAP8 495 aaPredicted RBP4.79□□□□□ -1.64
CFHR3-205ENST00000471440 AVL9Q8NBF6 648 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 GPRC5AQ8NFJ5 357 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 GOT1L1Q8NHS2 421 aaPredicted RBP4.79□□□□□ -1.64
CFHR3-205ENST00000471440 NFKBIDQ8NI38 313 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 HMGB4Q8WW32 186 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 ATP2A3Q93084 1043 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 SPZ1Q9BXG8 430 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 SLC46A2Q9BY10 475 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 RIOX1Q9H6W3 641 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 SYNCQ9H7C4 482 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 L2HGDHQ9H9P8 463 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 NDUFAF4Q9P032 175 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 MORF4L1Q9UBU8 362 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 SEL1LQ9UBV2 794 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 HESX1Q9UBX0 185 aa4.79□□□□□ -1.64
CFHR3-205ENST00000471440 SLC25A10Q9UBX3 287 aaPredicted RBP4.79□□□□□ -1.64
CFHR3-205ENST00000471440 NAP1L2Q9ULW6 460 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms