RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 CAMK2GQ13555 558 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 TFDP2Q14188 446 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 STARD3Q14849 445 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 INO80DQ53TQ3 878 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 TMEM92Q6UXU6 159 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 RPL10LQ96L21 214 aaKnown RBP15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 MAK16Q9BXY0 300 aaKnown RBP15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZSCAN32Q9NX65 697 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 SUN2Q9UH99 717 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 SLCO3A1Q9UIG8 710 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 PACSIN2Q9UNF0 486 aaPredicted RBP15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 SLC8A2Q9UPR5 921 aa15.24■□□□□ 0.03
CDC42SE1-203ENST00000470278 CFAP47Q6ZTR5 3102 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 CCDC163A0A0D9SF12 145 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 EDDM13A0A1B0GTR0 161 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 TARSL2A2RTX5 802 aaKnown RBP15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 WASH3PC4AMC7 463 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 DFFAO00273 331 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 MT-CO1P00395 513 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 EPHX1P07099 455 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 MX2P20592 715 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 TGM2P21980 687 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 NUMBP49757 651 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 IL10RBQ08334 325 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 RSPO4Q2I0M5 234 aaPredicted RBP15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 DCAF12L1Q5VU92 463 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 LINGO4Q6UY18 593 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 DGLUCYQ7Z3D6 616 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 RASSF3Q86WH2 238 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 CCDC50Q8IVM0 306 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 ATPAF2Q8N5M1 289 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 FATE1Q969F0 183 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 ISG20Q96AZ6 181 aaKnown RBP15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 FAM126AQ9BYI3 521 aaPredicted RBP15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 POLMQ9NP87 494 aaPredicted RBP15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 DTLQ9NZJ0 730 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 EBF1Q9UH73 591 aa15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 IPO11Q9UI26 975 aaKnown RBP15.23■□□□□ 0.03
CDC42SE1-203ENST00000470278 USP27XA6NNY8 438 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 TTC34A8MYJ7 566 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 KIF5CO60282 957 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 SYNCRIPO60506 623 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 MAFKO60675 156 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 APBB3O95704 486 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 PYGMP11217 842 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 HLA-EP13747 358 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 MSNP26038 577 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 CETN2P41208 172 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 GARSP41250 739 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 WASP42768 502 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 NR2C2P49116 596 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 GBE1Q04446 702 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZNF33AQ06730 810 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 DMWDQ09019 674 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 ELAVL3Q14576 367 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 PUM1Q14671 1186 aaKnown RBP eCLIP15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 RFTN1Q14699 578 aaPredicted RBP15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 DLG2Q15700 870 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 HS1BP3Q53T59 392 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 KIAA1211LQ6NV74 962 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 C22orf39Q6P5X5 142 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 BBS12Q6ZW61 710 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZNF354CQ86Y25 554 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 RFX6Q8HWS3 928 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 TP53INP2Q8IXH6 220 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 PLPP6Q8IY26 295 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 PCDH20Q8N6Y1 951 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 ATP11CQ8NB49 1132 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 TSTD1Q8NFU3 115 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 PTPRN2Q92932 1015 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 HDAC11Q96DB2 347 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZNF599Q96NL3 588 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 OLFM3Q96PB7 478 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 TLR10Q9BXR5 811 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 OSBPL8Q9BZF1 889 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 CARD9Q9H257 536 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 SP110Q9HB58 689 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 TRMT1Q9NXH9 659 aaKnown RBP15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 JRKLQ9Y4A0 524 aa15.22■□□□□ 0.03
CDC42SE1-203ENST00000470278 TCRBV21S2A2A0A5A6 115 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 APOC4-APOC2K7ER74 178 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 ALOX15BO15296 676 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 SMAD6O43541 496 aaKnown RBP15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 CST8O60676 142 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZNF821O75541 412 aaPredicted RBP15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 ALDH1A2O94788 518 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 APOC2P02655 101 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 KRT10P13645 584 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 COPAP53621 1224 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 RPS6KA1Q15418 735 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 C9orf64Q5T6V5 341 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 TMCO4Q5TGY1 634 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 ARHGAP36Q6ZRI8 547 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 BZW1Q7L1Q6 419 aaKnown RBP15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 ZNF366Q8N895 744 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 OR2T3Q8NH03 318 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 CCDC114Q96M63 670 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 TSGA13Q96PP4 275 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 HHIPQ96QV1 700 aa15.21■□□□□ 0.03
CDC42SE1-203ENST00000470278 HINFPQ9BQA5 517 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms